RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 LOC730098B7Z3J9 87 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 DEFB121Q5J5C9 76 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 BVES-AS1Q5T3Y7 98 aa0.24□□□□□ -2.37
GPHN-216ENST00000557678 MRPL34Q9BQ48 92 aaKnown RBP0.24□□□□□ -2.37
GPHN-216ENST00000557678 RRBP1Q9P2E9 1410 aaKnown RBP0.23□□□□□ -2.37
GPHN-216ENST00000557678 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
GPHN-216ENST00000557678 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
GPHN-216ENST00000557678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.23□□□□□ -2.37
GPHN-216ENST00000557678 PDCD5O14737 125 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 C18orf32Q8TCD1 76 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 SMCO4Q9NRQ5 59 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 ARFGEF2Q9Y6D5 1785 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 CFAP43Q8NDM7 1665 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 DCHS2Q6V1P9 2916 aa0.23□□□□□ -2.37
GPHN-216ENST00000557678 ANKARQ7Z5J8 1434 aa0.22□□□□□ -2.37
GPHN-216ENST00000557678 HECTD1Q9ULT8 2610 aa0.22□□□□□ -2.37
GPHN-216ENST00000557678 FSIP2Q5CZC0 6907 aa0.22□□□□□ -2.37
GPHN-216ENST00000557678 TNRC6CQ9HCJ0 1690 aaKnown RBP0.22□□□□□ -2.37
GPHN-216ENST00000557678 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
GPHN-216ENST00000557678 NWD1Q149M9 1564 aa0.22□□□□□ -2.37
GPHN-216ENST00000557678 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 NESP48681 1621 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 USP32Q8NFA0 1604 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 MRPL33O75394 65 aaKnown RBP0.21□□□□□ -2.38
GPHN-216ENST00000557678 NREPQ16612 68 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 H1FX-AS1Q4G0G2 97 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 MAP3K1Q13233 1512 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 APC2O95996 2303 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 NCOA2Q15596 1464 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 DOT1LQ8TEK3 1739 aa0.21□□□□□ -2.38
GPHN-216ENST00000557678 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
GPHN-216ENST00000557678 H3BVH4 76 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 IFI6P09912 130 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 DEFA5Q01523 94 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 KLK9Q2XQG4 91 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
GPHN-216ENST00000557678 CELSR1Q9NYQ6 3014 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 PDE4DIPQ5VU43 2346 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 ANKRD50Q9ULJ7 1429 aa0.2□□□□□ -2.38
GPHN-216ENST00000557678 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
GPHN-216ENST00000557678 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 FLNBO75369 2602 aaKnown RBP0.19□□□□□ -2.38
GPHN-216ENST00000557678 ABCA8O94911 1581 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 NBEAL1Q6ZS30 2694 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 ZNF831Q5JPB2 1677 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
GPHN-216ENST00000557678 H0YGG7 62 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 NDUFA4O00483 81 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 WFDC13Q8IUB5 93 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 PRO3102Q9H379 93 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 GNG13Q9P2W3 67 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 ACANP16112 2415 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 CSMD3Q7Z407 3707 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 STAB2Q8WWQ8 2551 aa0.19□□□□□ -2.38
GPHN-216ENST00000557678 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
GPHN-216ENST00000557678 THOC2Q8NI27 1593 aaKnown RBP0.19□□□□□ -2.38
GPHN-216ENST00000557678 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
GPHN-216ENST00000557678 C4AP0C0L4 1744 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 C4BP0C0L5 1744 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 DDX60LQ5H9U9 1706 aaKnown RBP0.18□□□□□ -2.38
GPHN-216ENST00000557678 TENM2Q9NT68 2774 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 ANK2Q01484 3957 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 KNL1Q8NG31 2342 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 LCE6AA0A183 80 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 M0R2T5 61 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 NDUFA3O95167 84 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 LINC00158P58513 81 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 ATXN8Q156A1 80 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 UBL5Q9BZL1 73 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 PLCH1Q4KWH8 1693 aa0.18□□□□□ -2.38
GPHN-216ENST00000557678 RALGAPBQ86X10 1494 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 NF1P21359 2839 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 DEFB131BA0A096LNP1 70 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 DEFB135Q30KP9 77 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 REV3LO60673 3130 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 DUOX2Q9NRD8 1548 aa0.17□□□□□ -2.38
GPHN-216ENST00000557678 EIF2AK4Q9P2K8 1649 aaKnown RBP0.16□□□□□ -2.38
GPHN-216ENST00000557678 LRRIQ1Q96JM4 1722 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 HFM1A2PYH4 1435 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 TGP01266 2768 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 ENHOQ6UWT2 76 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 EPG5Q9HCE0 2579 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 ZANQ9Y493 2812 aa0.16□□□□□ -2.38
GPHN-216ENST00000557678 UTP20O75691 2785 aaKnown RBP0.16□□□□□ -2.38
GPHN-216ENST00000557678 ETDCA0A1B0GVM5 59 aa0.15□□□□□ -2.39
GPHN-216ENST00000557678 SPRR2DP22532 72 aa0.15□□□□□ -2.39
GPHN-216ENST00000557678 CICQ96RK0 1608 aaPredicted RBP0.15□□□□□ -2.39
GPHN-216ENST00000557678 SETD2Q9BYW2 2564 aaPredicted RBP0.15□□□□□ -2.39
GPHN-216ENST00000557678 RICTORQ6R327 1708 aa0.15□□□□□ -2.39
GPHN-216ENST00000557678 MYO5CQ9NQX4 1742 aa0.15□□□□□ -2.39
GPHN-216ENST00000557678 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
GPHN-216ENST00000557678 ANKRD11Q6UB99 2663 aaPredicted RBP0.14□□□□□ -2.39
GPHN-216ENST00000557678 UGGT2Q9NYU1 1516 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 ITSN1Q15811 1721 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 PRM1P04553 51 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 SERF2P84101 59 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms