RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
KTN1-220ENST00000555172 SPINK9Q5DT21 86 aa1.37□□□□□ -2.19
KTN1-220ENST00000555172 EFCAB6Q5THR3 1501 aa1.37□□□□□ -2.19
KTN1-220ENST00000555172 SYCP2Q9BX26 1530 aa1.37□□□□□ -2.19
KTN1-220ENST00000555172 NWD1Q149M9 1564 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 ZNF462Q96JM2 2506 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 COX6A2Q02221 97 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 LELP1Q5T871 98 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 C2CD3Q4AC94 2353 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 CACNA1AO00555 2505 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 MRPL34Q9BQ48 92 aaKnown RBP1.36□□□□□ -2.19
KTN1-220ENST00000555172 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
KTN1-220ENST00000555172 TOP2AP11388 1531 aaKnown RBP1.35□□□□□ -2.19
KTN1-220ENST00000555172 A0A0D9SG42 100 aa1.35□□□□□ -2.19
KTN1-220ENST00000555172 LY75O60449 1722 aa1.35□□□□□ -2.19
KTN1-220ENST00000555172 IGIPA6NJ69 53 aa1.34□□□□□ -2.19
KTN1-220ENST00000555172 NDUFA3O95167 84 aa1.34□□□□□ -2.19
KTN1-220ENST00000555172 NMES1Q9C002 83 aa1.34□□□□□ -2.19
KTN1-220ENST00000555172 CROCC2H7BZ55 1655 aa1.34□□□□□ -2.19
KTN1-220ENST00000555172 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.2
KTN1-220ENST00000555172 TOMM5Q8N4H5 51 aa1.34□□□□□ -2.2
KTN1-220ENST00000555172 PTPRZ1P23471 2315 aaPredicted RBP1.33□□□□□ -2.2
KTN1-220ENST00000555172 BIVM-ERCC5R4GMW8 1640 aa1.33□□□□□ -2.2
KTN1-220ENST00000555172 PRO3102Q9H379 93 aa1.33□□□□□ -2.2
KTN1-220ENST00000555172 CDKN2A-AS1Q9UH64 79 aa1.33□□□□□ -2.2
KTN1-220ENST00000555172 SPTBN2O15020 2390 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 LOC730098B7Z3J9 87 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 USMG5Q96IX5 58 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 CNFNQ9BYD5 112 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 AGLP35573 1532 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 ABCA5Q8WWZ7 1642 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 ANKRD36CQ5JPF3 1778 aa1.32□□□□□ -2.2
KTN1-220ENST00000555172 CACNA1HO95180 2353 aa1.31□□□□□ -2.2
KTN1-220ENST00000555172 Q8IZM0 81 aa1.31□□□□□ -2.2
KTN1-220ENST00000555172 CMC2Q9NRP2 79 aa1.31□□□□□ -2.2
KTN1-220ENST00000555172 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 DEFB114Q30KQ6 69 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 DDX60LQ5H9U9 1706 aaKnown RBP1.3□□□□□ -2.2
KTN1-220ENST00000555172 SPRR1AP35321 89 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 MEGF8Q7Z7M0 2845 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
KTN1-220ENST00000555172 ZNF292O60281 2723 aa1.3□□□□□ -2.2
KTN1-220ENST00000555172 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
KTN1-220ENST00000555172 TIMM8BQ9Y5J9 83 aaPredicted RBP1.29□□□□□ -2.2
KTN1-220ENST00000555172 F8P00451 2351 aa1.29□□□□□ -2.2
KTN1-220ENST00000555172 CHD9Q3L8U1 2897 aa1.29□□□□□ -2.2
KTN1-220ENST00000555172 ABRACLQ9P1F3 81 aa1.28□□□□□ -2.2
KTN1-220ENST00000555172 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
KTN1-220ENST00000555172 USP24Q9UPU5 2620 aa1.28□□□□□ -2.2
KTN1-220ENST00000555172 PLNP26678 52 aa1.28□□□□□ -2.2
KTN1-220ENST00000555172 TNRC6CQ9HCJ0 1690 aaKnown RBP1.27□□□□□ -2.21
KTN1-220ENST00000555172 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
KTN1-220ENST00000555172 COX6B1P14854 86 aa1.27□□□□□ -2.21
KTN1-220ENST00000555172 SERF2P84101 59 aa1.27□□□□□ -2.21
KTN1-220ENST00000555172 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
KTN1-220ENST00000555172 ADCY10Q96PN6 1610 aa1.27□□□□□ -2.21
KTN1-220ENST00000555172 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
KTN1-220ENST00000555172 LINC00158P58513 81 aa1.26□□□□□ -2.21
KTN1-220ENST00000555172 C3P01024 1663 aa1.26□□□□□ -2.21
KTN1-220ENST00000555172 SMIM27A0A1W2PRY6 76 aa1.25□□□□□ -2.21
KTN1-220ENST00000555172 H0YAA0 97 aa1.25□□□□□ -2.21
KTN1-220ENST00000555172 SPINK4O60575 86 aa1.25□□□□□ -2.21
KTN1-220ENST00000555172 KLK9Q2XQG4 91 aa1.25□□□□□ -2.21
KTN1-220ENST00000555172 GVINP1Q7Z2Y8 2422 aa1.24□□□□□ -2.21
KTN1-220ENST00000555172 SPRR1BP22528 89 aa1.24□□□□□ -2.21
KTN1-220ENST00000555172 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
KTN1-220ENST00000555172 KRTAP4-1Q9BYQ7 146 aa1.23□□□□□ -2.21
KTN1-220ENST00000555172 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
KTN1-220ENST00000555172 COX6B2Q6YFQ2 88 aa1.23□□□□□ -2.21
KTN1-220ENST00000555172 NRXN3Q9Y4C0 1643 aa1.23□□□□□ -2.21
KTN1-220ENST00000555172 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
KTN1-220ENST00000555172 KNL1Q8NG31 2342 aa1.22□□□□□ -2.21
KTN1-220ENST00000555172 CCL22O00626 93 aa1.22□□□□□ -2.21
KTN1-220ENST00000555172 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
KTN1-220ENST00000555172 ABCC8Q09428 1581 aa1.22□□□□□ -2.21
KTN1-220ENST00000555172 POLQO75417 2590 aa1.21□□□□□ -2.21
KTN1-220ENST00000555172 TTC28Q96AY4 2481 aa1.21□□□□□ -2.22
KTN1-220ENST00000555172 WFDC13Q8IUB5 93 aa1.21□□□□□ -2.22
KTN1-220ENST00000555172 DSPP15924 2871 aaKnown RBP1.21□□□□□ -2.22
KTN1-220ENST00000555172 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
KTN1-220ENST00000555172 CSMD3Q7Z407 3707 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 TRANK1O15050 2925 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 TOGARAM1Q9Y4F4 1720 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 ALMS1Q8TCU4 4167 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 ABCA12Q86UK0 2595 aa1.2□□□□□ -2.22
KTN1-220ENST00000555172 H0YGX0 51 aa1.19□□□□□ -2.22
KTN1-220ENST00000555172 Q5VSD8 79 aa1.19□□□□□ -2.22
KTN1-220ENST00000555172 COL6A3P12111 3177 aa1.18□□□□□ -2.22
KTN1-220ENST00000555172 CELSR2Q9HCU4 2923 aa1.18□□□□□ -2.22
KTN1-220ENST00000555172 TFF3Q07654 80 aa1.18□□□□□ -2.22
KTN1-220ENST00000555172 LINC00308Q8TCZ7 52 aa1.18□□□□□ -2.22
KTN1-220ENST00000555172 MINOS1Q5TGZ0 78 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 C4AP0C0L4 1744 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 C4BP0C0L5 1744 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 LINC01546A6NGU7 62 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 DEFB130BP0DP73 79 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 DEFB130AP0DP74 79 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 NOTCH1P46531 2555 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms