RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 IGKV2-29A2NJV5 120 aaPredicted RBP3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 K7ERS5 55 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 IGLV1-51P01701 117 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 IGHV3-30-3P0DP02 117 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 UBE2D3P61077 147 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 UBE2D2P62837 147 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 WFDC2Q14508 124 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 NTM-AS1Q6ZSK4 140 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 Q6ZUT4 128 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 TIMM21Q9BVV7 248 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
MTHFD1-206ENST00000554353 IGHV3-64A0A075B6Q5 118 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 F8W1H4 67 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 HIST1H4AP62805 103 aaKnown RBP3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 Q6ZTI0 123 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 MUSTN1Q8IVN3 82 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 MUC7Q8TAX7 377 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 TMEM263Q8WUH6 116 aaKnown RBP3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 WFDC10AQ9H1F0 79 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 CELA1Q9UNI1 258 aa3.41□□□□□ -1.86
MTHFD1-206ENST00000554353 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 TRBV10-1A0A0K0K1A3 114 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 IGHV3-33P01772 117 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 TMEM258P61165 79 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 COX6A2Q02221 97 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 PHF5AQ7RTV0 110 aaKnown RBP3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 KLK5Q9Y337 293 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-206ENST00000554353 A0A0B4J2C4 111 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 BPY2O14599 106 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 TCL1BO95988 128 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 SPINK8P0C7L1 97 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 SH2D6Q7Z4S9 175 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 C16orf74Q96GX8 76 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 XAGE1AQ9HD64 81 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 NOP10Q9NPE3 64 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
MTHFD1-206ENST00000554353 LCE6AA0A183 80 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 NDUFA1O15239 70 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 TIMM17BO60830 172 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 ETDBQ3ZM63 59 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 DPH3Q96FX2 82 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
MTHFD1-206ENST00000554353 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 LOC107984156A0A0G2JMH3 177 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 TRBV6-4A0A1B0GX49 114 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 UQCRQO14949 82 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 MIAQ16674 131 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 ARL17AQ8IVW1 177 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 ATP6V0E2Q8NHE4 81 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 LINC01600Q96MT4 127 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 CDC42SE2Q9NRR3 84 aa3.37□□□□□ -1.87
MTHFD1-206ENST00000554353 RYR1P21817 5038 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 TRBV30A0A0K0K1B3 111 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 IFITM1P13164 125 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 ZNF625Q96I27 306 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 FAT2Q9NYQ8 4349 aa3.36□□□□□ -1.87
MTHFD1-206ENST00000554353 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
MTHFD1-206ENST00000554353 TRGV2A0A075B6R0 118 aa3.35□□□□□ -1.87
MTHFD1-206ENST00000554353 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
MTHFD1-206ENST00000554353 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
MTHFD1-206ENST00000554353 HERC2O95714 4834 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 PKD1P98161 4303 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 IGLV4-60A0A075B6I1 120 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 TRGV4A0A0C4DH28 118 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 H7C2G1 150 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 NPC2P61916 151 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 C9orf153Q5TBE3 101 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 LINC00308Q8TCZ7 52 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 PPDPFLQ8WWR9 84 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 ICOSQ9Y6W8 199 aa3.34□□□□□ -1.87
MTHFD1-206ENST00000554353 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
MTHFD1-206ENST00000554353 SLC25A20O43772 301 aa3.33□□□□□ -1.88
MTHFD1-206ENST00000554353 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
MTHFD1-206ENST00000554353 A6NED7 52 aa3.32□□□□□ -1.88
MTHFD1-206ENST00000554353 CIRBPQ14011 172 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-206ENST00000554353 ATXN8Q156A1 80 aa3.32□□□□□ -1.88
MTHFD1-206ENST00000554353 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms