RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PRRC2CQ9Y520 2896 aaKnown RBP-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 SONP18583 2426 aaKnown RBP-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 HMGN3Q15651 99 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 WFDC13Q8IUB5 93 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 C20orf78Q9BR46 151 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 MYO3AQ8NEV4 1616 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 NBASA2RRP1 2371 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 DNAH3Q8TD57 4116 aa-0.57□□□□□ -2.5
BRCA2-205ENST00000533776 ZNF831Q5JPB2 1677 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 D6R8Y8 96 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 LINC00032P0C843 101 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 FAUP35544 74 aaKnown RBP-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 COL5A1-AS1Q5SY13 56 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 MUSTN1Q8IVN3 82 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 AP4S1Q9Y587 144 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 HIVEP1P15822 2718 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 TMEM131LA2VDJ0 1609 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 CLIP1P30622 1438 aa-0.58□□□□□ -2.5
BRCA2-205ENST00000533776 NEXMIFQ5QGS0 1516 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 MXRA5Q9NR99 2828 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 ATP10BO94823 1461 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 SPTBN4Q9H254 2564 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 SPTY2D1-AS1A0A0U1RR47 76 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 M0R143 59 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 CCL22O00626 93 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 LEPROTL1O95214 131 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 MT4P47944 62 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 ALKAL2Q6UX46 152 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 CEP162Q5TB80 1403 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 BIRC6Q9NR09 4857 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 C4AP0C0L4 1744 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 C4BP0C0L5 1744 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 DNAH9Q9NYC9 4486 aa-0.59□□□□□ -2.5
BRCA2-205ENST00000533776 HTTP42858 3142 aa-0.6□□□□□ -2.5
BRCA2-205ENST00000533776 USP32Q8NFA0 1604 aa-0.6□□□□□ -2.5
BRCA2-205ENST00000533776 ATP7BP35670 1465 aa-0.6□□□□□ -2.5
BRCA2-205ENST00000533776 POLR1AO95602 1720 aaPredicted RBP-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 SUPT6HQ7KZ85 1726 aaKnown RBP-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 TROQ12816 1431 aaPredicted RBP-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 UQCRHLA0A096LP55 91 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 CDKN2A-AS1Q9UH64 79 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 VPS13DQ5THJ4 4388 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 ABCA13Q86UQ4 5058 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 LRRC7Q96NW7 1537 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 PKHD1L1Q86WI1 4243 aa-0.6□□□□□ -2.51
BRCA2-205ENST00000533776 ZZEF1O43149 2961 aa-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 COX7BP24311 80 aa-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 HEPN1Q6WQI6 88 aa-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 UBR3Q6ZT12 1888 aa-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 TEP1Q99973 2627 aaKnown RBP-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 DOT1LQ8TEK3 1739 aa-0.61□□□□□ -2.51
BRCA2-205ENST00000533776 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 HECTD1Q9ULT8 2610 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 RGPD8O14715 1765 aaPredicted RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 RGPD5Q99666 1765 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 USP9YO00507 2555 aaPredicted RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 EPG5Q9HCE0 2579 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 HMGN2P05204 90 aaKnown RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 NMSQ5H8A3 153 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 ZNF720Q7Z2F6 126 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 SPRR2FQ96RM1 72 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 TIAM2Q8IVF5 1701 aa-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 APOBP04114 4563 aaKnown RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 RGPD3A6NKT7 1758 aaPredicted RBP-0.62□□□□□ -2.51
BRCA2-205ENST00000533776 NDUFA3O95167 84 aa-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 MT1AP04731 61 aa-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 SCN11AQ9UI33 1791 aa-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 DMXL1Q9Y485 3027 aa-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 MUC17Q685J3 4493 aa-0.63□□□□□ -2.51
BRCA2-205ENST00000533776 ANK3Q12955 4377 aaKnown RBP-0.64□□□□□ -2.51
BRCA2-205ENST00000533776 TACC2O95359 2948 aa-0.64□□□□□ -2.51
BRCA2-205ENST00000533776 S100A8P05109 93 aa-0.64□□□□□ -2.51
BRCA2-205ENST00000533776 PKIAP61925 76 aa-0.64□□□□□ -2.51
BRCA2-205ENST00000533776 ITPR3Q14573 2671 aa-0.64□□□□□ -2.51
BRCA2-205ENST00000533776 LRRC9Q6ZRR7 1453 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 IQCF6A8MYZ5 107 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 GYPAP02724 150 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 PDE4DIPQ5VU43 2346 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 LTN1O94822 1766 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 WIZO95785 1651 aa-0.65□□□□□ -2.51
BRCA2-205ENST00000533776 DSPP15924 2871 aaKnown RBP-0.66□□□□□ -2.51
BRCA2-205ENST00000533776 CCNB3Q8WWL7 1395 aa-0.66□□□□□ -2.51
BRCA2-205ENST00000533776 NESP48681 1621 aa-0.66□□□□□ -2.51
BRCA2-205ENST00000533776 COX6B2Q6YFQ2 88 aa-0.66□□□□□ -2.52
BRCA2-205ENST00000533776 PLXNC1O60486 1568 aa-0.66□□□□□ -2.52
BRCA2-205ENST00000533776 DNHD1Q96M86 4753 aa-0.66□□□□□ -2.52
BRCA2-205ENST00000533776 LAMA1P25391 3075 aa-0.67□□□□□ -2.52
BRCA2-205ENST00000533776 SPG11Q96JI7 2443 aa-0.67□□□□□ -2.52
BRCA2-205ENST00000533776 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
BRCA2-205ENST00000533776 A0A1B0GUT8 65 aa-0.67□□□□□ -2.52
BRCA2-205ENST00000533776 NWD1Q149M9 1564 aa-0.67□□□□□ -2.52
BRCA2-205ENST00000533776 TRAV21A0A0B4J279 112 aa-0.68□□□□□ -2.52
BRCA2-205ENST00000533776 PLGLAQ15195 96 aa-0.68□□□□□ -2.52
BRCA2-205ENST00000533776 TTC37Q6PGP7 1564 aa-0.68□□□□□ -2.52
BRCA2-205ENST00000533776 GAFA1Q96PS6 74 aa-0.68□□□□□ -2.52
BRCA2-205ENST00000533776 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
BRCA2-205ENST00000533776 ABCC3O15438 1527 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms