RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TSPAN13O95857 204 aa10.46□□□□□ -0.73
PKP3-208ENST00000531857 TRAV13-2A0A0B4J235 113 aa10.45□□□□□ -0.74
PKP3-208ENST00000531857 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
PKP3-208ENST00000531857 H0Y9J4 135 aa10.45□□□□□ -0.74
PKP3-208ENST00000531857 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
PKP3-208ENST00000531857 RNF151Q2KHN1 245 aa10.45□□□□□ -0.74
PKP3-208ENST00000531857 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
PKP3-208ENST00000531857 LINC00158P58513 81 aa10.44□□□□□ -0.74
PKP3-208ENST00000531857 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
PKP3-208ENST00000531857 MUC2Q02817 5179 aa10.44□□□□□ -0.74
PKP3-208ENST00000531857 SCGB1C2P0DMR2 95 aa10.43□□□□□ -0.74
PKP3-208ENST00000531857 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
PKP3-208ENST00000531857 PSMB2P49721 201 aa10.42□□□□□ -0.74
PKP3-208ENST00000531857 KIAA0087Q14695 138 aa10.42□□□□□ -0.74
PKP3-208ENST00000531857 Q1RN00 199 aa10.42□□□□□ -0.74
PKP3-208ENST00000531857 C10orf25Q5T742 122 aa10.41□□□□□ -0.74
PKP3-208ENST00000531857 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
PKP3-208ENST00000531857 FAM19A5Q7Z5A7 132 aaPredicted RBP10.4□□□□□ -0.74
PKP3-208ENST00000531857 KRTAP7-1Q8IUC3 87 aa10.4□□□□□ -0.74
PKP3-208ENST00000531857 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.74
PKP3-208ENST00000531857 IGLV1-50A0A075B6I6 118 aa10.39□□□□□ -0.75
PKP3-208ENST00000531857 NDUFC2O95298 119 aa10.39□□□□□ -0.75
PKP3-208ENST00000531857 PRR4Q16378 134 aa10.39□□□□□ -0.75
PKP3-208ENST00000531857 UNQ6190/PRO20217Q6UXQ8 127 aa10.38□□□□□ -0.75
PKP3-208ENST00000531857 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
PKP3-208ENST00000531857 M0QXV9 152 aa10.37□□□□□ -0.75
PKP3-208ENST00000531857 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
PKP3-208ENST00000531857 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
PKP3-208ENST00000531857 KRTAP9-2Q9BYQ4 174 aa10.37□□□□□ -0.75
PKP3-208ENST00000531857 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
PKP3-208ENST00000531857 RPL13AP40429 203 aaKnown RBP10.36□□□□□ -0.75
PKP3-208ENST00000531857 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
PKP3-208ENST00000531857 DAND5Q8N907 189 aa10.36□□□□□ -0.75
PKP3-208ENST00000531857 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
PKP3-208ENST00000531857 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
PKP3-208ENST00000531857 SOSTDC1Q6X4U4 206 aa10.35□□□□□ -0.75
PKP3-208ENST00000531857 EIF4EBP3O60516 100 aaPredicted RBP10.34□□□□□ -0.75
PKP3-208ENST00000531857 PFN2P35080 140 aa10.34□□□□□ -0.75
PKP3-208ENST00000531857 NPC2P61916 151 aa10.34□□□□□ -0.75
PKP3-208ENST00000531857 H3BMG7 143 aa10.33□□□□□ -0.76
PKP3-208ENST00000531857 K7ERU9 68 aa10.33□□□□□ -0.76
PKP3-208ENST00000531857 H7C2G1 150 aa10.32□□□□□ -0.76
PKP3-208ENST00000531857 J3QR89 54 aa10.32□□□□□ -0.76
PKP3-208ENST00000531857 UBE2BP63146 152 aa10.32□□□□□ -0.76
PKP3-208ENST00000531857 TCL1BO95988 128 aa10.31□□□□□ -0.76
PKP3-208ENST00000531857 RPL28P46779 137 aaKnown RBP10.31□□□□□ -0.76
PKP3-208ENST00000531857 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
PKP3-208ENST00000531857 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
PKP3-208ENST00000531857 H0YGX0 51 aa10.3□□□□□ -0.76
PKP3-208ENST00000531857 TRIAP1O43715 76 aa10.3□□□□□ -0.76
PKP3-208ENST00000531857 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
PKP3-208ENST00000531857 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
PKP3-208ENST00000531857 A0A0U1RQV1 116 aa10.28□□□□□ -0.76
PKP3-208ENST00000531857 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
PKP3-208ENST00000531857 PRO0461Q9UI25 63 aa10.27□□□□□ -0.77
PKP3-208ENST00000531857 NDUFC2-KCTD14E9PQ53 114 aa10.26□□□□□ -0.77
PKP3-208ENST00000531857 LST1O00453 97 aa10.26□□□□□ -0.77
PKP3-208ENST00000531857 SNCGO76070 127 aa10.26□□□□□ -0.77
PKP3-208ENST00000531857 OCIAD2Q56VL3 154 aa10.26□□□□□ -0.77
PKP3-208ENST00000531857 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
PKP3-208ENST00000531857 H3BT86 120 aa10.25□□□□□ -0.77
PKP3-208ENST00000531857 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
PKP3-208ENST00000531857 TRACP01848 142 aa10.25□□□□□ -0.77
PKP3-208ENST00000531857 A0A1B0GX51 115 aa10.24□□□□□ -0.77
PKP3-208ENST00000531857 ZNF861PO60384 105 aa10.24□□□□□ -0.77
PKP3-208ENST00000531857 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
PKP3-208ENST00000531857 SLC25A20O43772 301 aa10.23□□□□□ -0.77
PKP3-208ENST00000531857 LINC00337Q8N6G1 96 aa10.23□□□□□ -0.77
PKP3-208ENST00000531857 OR13C6PQ8NH95 151 aa10.22□□□□□ -0.77
PKP3-208ENST00000531857 A0A087X002 238 aa10.21□□□□□ -0.77
PKP3-208ENST00000531857 C9JAW5 83 aa10.21□□□□□ -0.77
PKP3-208ENST00000531857 TEN1Q86WV5 123 aa10.21□□□□□ -0.77
PKP3-208ENST00000531857 ANKRD29Q8N6D5 301 aa10.21□□□□□ -0.77
PKP3-208ENST00000531857 C22orf24Q9Y442 160 aa10.2□□□□□ -0.78
PKP3-208ENST00000531857 S100A7L2Q5SY68 101 aa10.19□□□□□ -0.78
PKP3-208ENST00000531857 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
PKP3-208ENST00000531857 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
PKP3-208ENST00000531857 H3BQ85 93 aa10.17□□□□□ -0.78
PKP3-208ENST00000531857 ETDBQ3ZM63 59 aa10.17□□□□□ -0.78
PKP3-208ENST00000531857 XAGE1AQ9HD64 81 aa10.17□□□□□ -0.78
PKP3-208ENST00000531857 FAT4Q6V0I7 4981 aa10.15□□□□□ -0.78
PKP3-208ENST00000531857 DNAL4O96015 105 aa10.15□□□□□ -0.78
PKP3-208ENST00000531857 GHRHP01286 108 aa10.15□□□□□ -0.78
PKP3-208ENST00000531857 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
PKP3-208ENST00000531857 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
PKP3-208ENST00000531857 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
PKP3-208ENST00000531857 KRTAP9-6A0A140TA67 174 aa10.14□□□□□ -0.79
PKP3-208ENST00000531857 M0R378 163 aa10.14□□□□□ -0.79
PKP3-208ENST00000531857 CLEC2BQ92478 149 aa10.14□□□□□ -0.79
PKP3-208ENST00000531857 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
PKP3-208ENST00000531857 CRYGAP11844 174 aa10.13□□□□□ -0.79
PKP3-208ENST00000531857 ANAPC11Q9NYG5 84 aa10.13□□□□□ -0.79
PKP3-208ENST00000531857 BCE1O60756 84 aa10.12□□□□□ -0.79
PKP3-208ENST00000531857 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
PKP3-208ENST00000531857 MRPL55Q7Z7F7 128 aaKnown RBP10.11□□□□□ -0.79
PKP3-208ENST00000531857 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
PKP3-208ENST00000531857 RPL37AP8A6NKH3 93 aa10.09□□□□□ -0.79
PKP3-208ENST00000531857 BAALC-AS2P0C853 105 aa10.08□□□□□ -0.8
PKP3-208ENST00000531857 VPREB1P12018 145 aa10.08□□□□□ -0.8
PKP3-208ENST00000531857 LINC00167Q96N53 147 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms