RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 APLNQ9ULZ1 77 aa0.33□□□□□ -2.36
COPB1-203ENST00000525214 APC2O95996 2303 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
COPB1-203ENST00000525214 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 PTPN23Q9H3S7 1636 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
COPB1-203ENST00000525214 IFI6P09912 130 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 SMIM13P0DJ93 91 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 HMGA1P17096 107 aaKnown RBP0.32□□□□□ -2.36
COPB1-203ENST00000525214 KLK9Q2XQG4 91 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 MRPL34Q9BQ48 92 aaKnown RBP0.32□□□□□ -2.36
COPB1-203ENST00000525214 CCDC88BA6NC98 1476 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 ZNF831Q5JPB2 1677 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 COL6A3P12111 3177 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 BCORQ6W2J9 1755 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 CREBBPQ92793 2442 aa0.32□□□□□ -2.36
COPB1-203ENST00000525214 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
COPB1-203ENST00000525214 ANKARQ7Z5J8 1434 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 NCOA2Q15596 1464 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 IFI27P40305 119 aaPredicted RBP0.31□□□□□ -2.36
COPB1-203ENST00000525214 MAP3K1Q13233 1512 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 MAGI3Q5TCQ9 1506 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 PIK3C2BO00750 1634 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 TRANK1O15050 2925 aa0.31□□□□□ -2.36
COPB1-203ENST00000525214 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 TIAM2Q8IVF5 1701 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 HEPN1Q6WQI6 88 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 COX6B2Q6YFQ2 88 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 SMCO4Q9NRQ5 59 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 EP300Q09472 2414 aaPredicted RBP0.3□□□□□ -2.36
COPB1-203ENST00000525214 PREX1Q8TCU6 1659 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 DCHS2Q6V1P9 2916 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 FLNAP21333 2647 aaKnown RBP0.3□□□□□ -2.36
COPB1-203ENST00000525214 POLR1AO95602 1720 aaPredicted RBP0.3□□□□□ -2.36
COPB1-203ENST00000525214 DOT1LQ8TEK3 1739 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 NBASA2RRP1 2371 aa0.3□□□□□ -2.36
COPB1-203ENST00000525214 CEP170BQ9Y4F5 1589 aaPredicted RBP0.29□□□□□ -2.36
COPB1-203ENST00000525214 DEFA5Q01523 94 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 LELP1Q5T871 98 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 CDKN2A-AS1Q9UH64 79 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
COPB1-203ENST00000525214 SCN11AQ9UI33 1791 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 ARFGEF2Q9Y6D5 1785 aa0.29□□□□□ -2.36
COPB1-203ENST00000525214 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
COPB1-203ENST00000525214 HECTD1Q9ULT8 2610 aa0.28□□□□□ -2.36
COPB1-203ENST00000525214 LRRIQ1Q96JM4 1722 aa0.28□□□□□ -2.36
COPB1-203ENST00000525214 PDCD5O14737 125 aa0.28□□□□□ -2.36
COPB1-203ENST00000525214 NREPQ16612 68 aa0.28□□□□□ -2.36
COPB1-203ENST00000525214 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.37
COPB1-203ENST00000525214 DSPP15924 2871 aaKnown RBP0.27□□□□□ -2.37
COPB1-203ENST00000525214 CACNA1AO00555 2505 aa0.27□□□□□ -2.37
COPB1-203ENST00000525214 ABCA8O94911 1581 aa0.27□□□□□ -2.37
COPB1-203ENST00000525214 ACANP16112 2415 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 STAB1Q9NY15 2570 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 LCE6AA0A183 80 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 H3BVH4 76 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 NDUFA3O95167 84 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 NWD1Q149M9 1564 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 MYO5CQ9NQX4 1742 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 DOPEY1Q5JWR5 2465 aa0.26□□□□□ -2.37
COPB1-203ENST00000525214 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 FLNCQ14315 2725 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 ANKRD50Q9ULJ7 1429 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 NDUFA4O00483 81 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 WFDC13Q8IUB5 93 aa0.25□□□□□ -2.37
COPB1-203ENST00000525214 TNXBP22105 4242 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 PRRC2CQ9Y520 2896 aaKnown RBP0.24□□□□□ -2.37
COPB1-203ENST00000525214 CFAP43Q8NDM7 1665 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 TNRC6CQ9HCJ0 1690 aaKnown RBP0.24□□□□□ -2.37
COPB1-203ENST00000525214 IQGAP3Q86VI3 1631 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 UGGT2Q9NYU1 1516 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 FLNBO75369 2602 aaKnown RBP0.24□□□□□ -2.37
COPB1-203ENST00000525214 NESP48681 1621 aa0.24□□□□□ -2.37
COPB1-203ENST00000525214 CD163L1Q9NR16 1453 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 ALMS1Q8TCU4 4167 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 BPTFQ12830 3046 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 MUC2Q02817 5179 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 LPAP08519 4548 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 HILPDAQ9Y5L2 63 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 RICTORQ6R327 1708 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 SPTBN4Q9H254 2564 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 DUOX2Q9NRD8 1548 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 AKAP13Q12802 2813 aa0.23□□□□□ -2.37
COPB1-203ENST00000525214 PLCH1Q4KWH8 1693 aa0.22□□□□□ -2.37
COPB1-203ENST00000525214 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
COPB1-203ENST00000525214 TENM2Q9NT68 2774 aa0.22□□□□□ -2.37
COPB1-203ENST00000525214 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 SETD2Q9BYW2 2564 aaPredicted RBP0.21□□□□□ -2.38
COPB1-203ENST00000525214 PKD1L2Q7Z442 2459 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 PRM1P04553 51 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 ENHOQ6UWT2 76 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 PRO3102Q9H379 93 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 GNG13Q9P2W3 67 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms