RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 VWFP04275 2813 aa0.46□□□□□ -2.34
PTPN12-213ENST00000519553 ZC3H13Q5T200 1668 aaKnown RBP0.46□□□□□ -2.34
PTPN12-213ENST00000519553 CICQ96RK0 1608 aaPredicted RBP0.46□□□□□ -2.34
PTPN12-213ENST00000519553 DEFB109BQ30KR1 87 aa0.46□□□□□ -2.34
PTPN12-213ENST00000519553 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
PTPN12-213ENST00000519553 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
PTPN12-213ENST00000519553 TENM4Q6N022 2769 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 PARP4Q9UKK3 1724 aaKnown RBP0.45□□□□□ -2.34
PTPN12-213ENST00000519553 SPINK1P00995 79 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 NESP48681 1621 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 SPTA1P02549 2419 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 CDC42BPGQ6DT37 1551 aa0.45□□□□□ -2.34
PTPN12-213ENST00000519553 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
PTPN12-213ENST00000519553 ATRQ13535 2644 aa0.44□□□□□ -2.34
PTPN12-213ENST00000519553 SPINK4O60575 86 aa0.44□□□□□ -2.34
PTPN12-213ENST00000519553 NCOR1O75376 2440 aa0.44□□□□□ -2.34
PTPN12-213ENST00000519553 ITSN1Q15811 1721 aa0.44□□□□□ -2.34
PTPN12-213ENST00000519553 LMTK2Q8IWU2 1503 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 ASXL1Q8IXJ9 1541 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 H1FX-AS1Q4G0G2 97 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 APLNQ9ULZ1 77 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 WIZO95785 1651 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 PLCH1Q4KWH8 1693 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 TNRC6CQ9HCJ0 1690 aaKnown RBP0.43□□□□□ -2.34
PTPN12-213ENST00000519553 BSNQ9UPA5 3926 aa0.43□□□□□ -2.34
PTPN12-213ENST00000519553 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 RICTORQ6R327 1708 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 SMIM31A0A1B0GVY4 71 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 NDUFA4O00483 81 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 NHSQ6T4R5 1651 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 EFCAB5A4FU69 1503 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 ERICH3Q5RHP9 1530 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 ABCA9Q8IUA7 1624 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 MROH1Q8NDA8 1641 aa0.42□□□□□ -2.34
PTPN12-213ENST00000519553 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
PTPN12-213ENST00000519553 DIP2AQ14689 1571 aa0.41□□□□□ -2.34
PTPN12-213ENST00000519553 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
PTPN12-213ENST00000519553 CDKN2A-AS1Q9UH64 79 aa0.41□□□□□ -2.34
PTPN12-213ENST00000519553 U3KQA8 63 aa0.41□□□□□ -2.34
PTPN12-213ENST00000519553 WNK2Q9Y3S1 2297 aa0.4□□□□□ -2.34
PTPN12-213ENST00000519553 HUWE1Q7Z6Z7 4374 aaKnown RBP0.4□□□□□ -2.35
PTPN12-213ENST00000519553 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 CSPG4Q6UVK1 2322 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 MADDQ8WXG6 1647 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 H3BVH4 76 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 KLK9Q2XQG4 91 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 LELP1Q5T871 98 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
PTPN12-213ENST00000519553 PRKDCP78527 4128 aaKnown RBP0.4□□□□□ -2.35
PTPN12-213ENST00000519553 ATXN8Q156A1 80 aa0.39□□□□□ -2.35
PTPN12-213ENST00000519553 HILPDAQ9Y5L2 63 aa0.39□□□□□ -2.35
PTPN12-213ENST00000519553 RALGAPBQ86X10 1494 aa0.39□□□□□ -2.35
PTPN12-213ENST00000519553 INO80Q9ULG1 1556 aaPredicted RBP0.39□□□□□ -2.35
PTPN12-213ENST00000519553 RNF17Q9BXT8 1623 aaKnown RBP0.38□□□□□ -2.35
PTPN12-213ENST00000519553 KNL1Q8NG31 2342 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 CHD8Q9HCK8 2581 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 A0A087WWC5 75 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 NDUFA3O95167 84 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 FXYD6Q9H0Q3 95 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 KCNQ1DNQ9H478 68 aa0.38□□□□□ -2.35
PTPN12-213ENST00000519553 DDX60LQ5H9U9 1706 aaKnown RBP0.38□□□□□ -2.35
PTPN12-213ENST00000519553 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 PKD1L1Q8TDX9 2849 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 TJP1Q07157 1748 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 NRAPQ86VF7 1730 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 TNXBP22105 4242 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 ABCA2Q9BZC7 2435 aa0.37□□□□□ -2.35
PTPN12-213ENST00000519553 THOC2Q8NI27 1593 aaKnown RBP0.36□□□□□ -2.35
PTPN12-213ENST00000519553 UBR5O95071 2799 aaPredicted RBP0.36□□□□□ -2.35
PTPN12-213ENST00000519553 C4AP0C0L4 1744 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 C4BP0C0L5 1744 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 DEFB131BA0A096LNP1 70 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 C3orf79P0CE67 100 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 ENHOQ6UWT2 76 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 WFDC13Q8IUB5 93 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 HFM1A2PYH4 1435 aa0.36□□□□□ -2.35
PTPN12-213ENST00000519553 BPTFQ12830 3046 aa0.35□□□□□ -2.35
PTPN12-213ENST00000519553 KMT2AQ03164 3969 aa0.35□□□□□ -2.35
PTPN12-213ENST00000519553 PLXNC1O60486 1568 aa0.35□□□□□ -2.35
PTPN12-213ENST00000519553 CELSR1Q9NYQ6 3014 aa0.35□□□□□ -2.35
PTPN12-213ENST00000519553 DEPDC5O75140 1603 aa0.35□□□□□ -2.35
PTPN12-213ENST00000519553 TRANK1O15050 2925 aa0.34□□□□□ -2.35
PTPN12-213ENST00000519553 EP300Q09472 2414 aaPredicted RBP0.34□□□□□ -2.35
PTPN12-213ENST00000519553 UBL5Q9BZL1 73 aa0.34□□□□□ -2.36
PTPN12-213ENST00000519553 PRO3102Q9H379 93 aa0.34□□□□□ -2.36
PTPN12-213ENST00000519553 CCDC180Q9P1Z9 1646 aa0.34□□□□□ -2.36
PTPN12-213ENST00000519553 KMT2DO14686 5537 aa0.33□□□□□ -2.36
PTPN12-213ENST00000519553 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
PTPN12-213ENST00000519553 MRPL33O75394 65 aaKnown RBP0.33□□□□□ -2.36
PTPN12-213ENST00000519553 DEFB114Q30KQ6 69 aa0.33□□□□□ -2.36
PTPN12-213ENST00000519553 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
PTPN12-213ENST00000519553 LYNX1G3V0Z9 82 aa0.32□□□□□ -2.36
PTPN12-213ENST00000519553 H0YAA0 97 aa0.32□□□□□ -2.36
PTPN12-213ENST00000519553 PDE4DIPQ5VU43 2346 aa0.32□□□□□ -2.36
PTPN12-213ENST00000519553 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
PTPN12-213ENST00000519553 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
PTPN12-213ENST00000519553 PRM1P04553 51 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms