RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MRPL33O75394 65 aaKnown RBP1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 NMES1Q9C002 83 aa1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 CACNA1EQ15878 2313 aa1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 IQGAP1P46940 1657 aa1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 TNCP24821 2201 aa1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 LAMA2P24043 3122 aaKnown RBP1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 EFCAB6Q5THR3 1501 aa1.35□□□□□ -2.19
RNU4-60P-201ENST00000517239 SZT2Q5T011 3432 aa1.34□□□□□ -2.19
RNU4-60P-201ENST00000517239 CCL22O00626 93 aa1.34□□□□□ -2.19
RNU4-60P-201ENST00000517239 DEFB114Q30KQ6 69 aa1.34□□□□□ -2.19
RNU4-60P-201ENST00000517239 KRTAP21-3Q3LHN1 58 aa1.34□□□□□ -2.19
RNU4-60P-201ENST00000517239 NCBP2-AS2Q69YL0 99 aa1.34□□□□□ -2.19
RNU4-60P-201ENST00000517239 MKI67P46013 3256 aaKnown RBP1.34□□□□□ -2.2
RNU4-60P-201ENST00000517239 KIAA0586Q9BVV6 1533 aa1.34□□□□□ -2.2
RNU4-60P-201ENST00000517239 EYSQ5T1H1 3165 aa1.34□□□□□ -2.2
RNU4-60P-201ENST00000517239 ABCC8Q09428 1581 aa1.34□□□□□ -2.2
RNU4-60P-201ENST00000517239 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 DOPEY2Q9Y3R5 2298 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 PIEZO2Q9H5I5 2752 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 DEFB131BA0A096LNP1 70 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 COX6B1P14854 86 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 IQGAP2Q13576 1575 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 OTOGLQ3ZCN5 2332 aa1.33□□□□□ -2.2
RNU4-60P-201ENST00000517239 PRUNE2Q8WUY3 3088 aa1.32□□□□□ -2.2
RNU4-60P-201ENST00000517239 CENPFP49454 3210 aa1.32□□□□□ -2.2
RNU4-60P-201ENST00000517239 SERF2P84101 59 aa1.32□□□□□ -2.2
RNU4-60P-201ENST00000517239 MROH2BQ7Z745 1585 aa1.32□□□□□ -2.2
RNU4-60P-201ENST00000517239 VCANP13611 3396 aa1.31□□□□□ -2.2
RNU4-60P-201ENST00000517239 PLCE1Q9P212 2302 aa1.31□□□□□ -2.2
RNU4-60P-201ENST00000517239 LCE3AQ5TA76 89 aa1.31□□□□□ -2.2
RNU4-60P-201ENST00000517239 TRIOBPQ9H2D6 2365 aa1.31□□□□□ -2.2
RNU4-60P-201ENST00000517239 AGLP35573 1532 aa1.3□□□□□ -2.2
RNU4-60P-201ENST00000517239 CEP290O15078 2479 aa1.3□□□□□ -2.2
RNU4-60P-201ENST00000517239 NDUFA3O95167 84 aa1.3□□□□□ -2.2
RNU4-60P-201ENST00000517239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU4-60P-201ENST00000517239 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
RNU4-60P-201ENST00000517239 PRH1P02810 166 aa1.29□□□□□ -2.2
RNU4-60P-201ENST00000517239 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
RNU4-60P-201ENST00000517239 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
RNU4-60P-201ENST00000517239 SPRR1AP35321 89 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 CRIP1P50238 77 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 LELP1Q5T871 98 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 Q5VSD8 79 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 COX6B2Q6YFQ2 88 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 PRO3102Q9H379 93 aa1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 DDX60Q8IY21 1712 aaKnown RBP1.28□□□□□ -2.2
RNU4-60P-201ENST00000517239 CDC42BPAQ5VT25 1732 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 PLNP26678 52 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 CDKN2A-AS1Q9UH64 79 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 SPTBN5Q9NRC6 3674 aaKnown RBP1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 CFAP47Q6ZTR5 3102 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 MAST4O15021 2626 aa1.27□□□□□ -2.21
RNU4-60P-201ENST00000517239 TRANK1O15050 2925 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 BRCA2P51587 3418 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 USF3Q68DE3 2245 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 SPRR1BP22528 89 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 CMC2Q9NRP2 79 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 ANKRD11Q6UB99 2663 aaPredicted RBP1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 TEP1Q99973 2627 aaKnown RBP1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 NAV2Q8IVL1 2488 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 CFAP54Q96N23 3096 aa1.26□□□□□ -2.21
RNU4-60P-201ENST00000517239 RANBP2P49792 3224 aaKnown RBP1.25□□□□□ -2.21
RNU4-60P-201ENST00000517239 SPTBN4Q9H254 2564 aa1.25□□□□□ -2.21
RNU4-60P-201ENST00000517239 BPTFQ12830 3046 aa1.25□□□□□ -2.21
RNU4-60P-201ENST00000517239 DEPDC5O75140 1603 aa1.25□□□□□ -2.21
RNU4-60P-201ENST00000517239 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
RNU4-60P-201ENST00000517239 WDFY4Q6ZS81 3184 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 C5orf42Q9H799 3197 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 PTPRQQ9UMZ3 2332 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 MUC3AQ02505 3323 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 LINC00158P58513 81 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 GCN1Q92616 2671 aaKnown RBP1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 SAMD9LQ8IVG5 1584 aa1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 MAP1BP46821 2468 aaKnown RBP1.24□□□□□ -2.21
RNU4-60P-201ENST00000517239 CHD6Q8TD26 2715 aa1.23□□□□□ -2.21
RNU4-60P-201ENST00000517239 TOMM5Q8N4H5 51 aa1.23□□□□□ -2.21
RNU4-60P-201ENST00000517239 LAMA3Q16787 3333 aa1.23□□□□□ -2.21
RNU4-60P-201ENST00000517239 MUC6Q6W4X9 2439 aa1.23□□□□□ -2.21
RNU4-60P-201ENST00000517239 HTTP42858 3142 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 PTPRZ1P23471 2315 aaPredicted RBP1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 SPEGQ15772 3267 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 TTC28Q96AY4 2481 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 ITPR3Q14573 2671 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 KLK9Q2XQG4 91 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 WFDC13Q8IUB5 93 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 BDP1A6H8Y1 2624 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 MEGF8Q7Z7M0 2845 aa1.22□□□□□ -2.21
RNU4-60P-201ENST00000517239 ZFHX4Q86UP3 3567 aa1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 FASNP49327 2511 aaKnown RBP1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 LOC730098B7Z3J9 87 aa1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 H0YAA0 97 aa1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 CEP250Q9BV73 2442 aa1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 EPG5Q9HCE0 2579 aa1.21□□□□□ -2.22
RNU4-60P-201ENST00000517239 REV3LO60673 3130 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms