RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 LTN1O94822 1766 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 SPTA1P02549 2419 aa0.18□□□□□ -2.38
RNU6-488P-201ENST00000515918 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
RNU6-488P-201ENST00000515918 PRKDCP78527 4128 aaKnown RBP0.17□□□□□ -2.38
RNU6-488P-201ENST00000515918 CDKN2A-AS1Q9UH64 79 aa0.17□□□□□ -2.38
RNU6-488P-201ENST00000515918 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
RNU6-488P-201ENST00000515918 SPRR2DP22532 72 aa0.16□□□□□ -2.38
RNU6-488P-201ENST00000515918 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
RNU6-488P-201ENST00000515918 UMAD1C9J7I0 102 aa0.15□□□□□ -2.39
RNU6-488P-201ENST00000515918 WFDC13Q8IUB5 93 aa0.15□□□□□ -2.39
RNU6-488P-201ENST00000515918 C18orf32Q8TCD1 76 aa0.15□□□□□ -2.39
RNU6-488P-201ENST00000515918 AHNAK2Q8IVF2 5795 aa0.14□□□□□ -2.39
RNU6-488P-201ENST00000515918 SMIM13P0DJ93 91 aa0.14□□□□□ -2.39
RNU6-488P-201ENST00000515918 NWD1Q149M9 1564 aa0.14□□□□□ -2.39
RNU6-488P-201ENST00000515918 EP300Q09472 2414 aaPredicted RBP0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 PKD1L1Q8TDX9 2849 aa0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 LCE6AA0A183 80 aa0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 NDUFA3O95167 84 aa0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 RGPD8O14715 1765 aaPredicted RBP0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 RGPD5Q99666 1765 aa0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 TIAM2Q8IVF5 1701 aa0.13□□□□□ -2.39
RNU6-488P-201ENST00000515918 HSPG2P98160 4391 aa0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 ARFGEF2Q9Y6D5 1785 aa0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 TNRC6CQ9HCJ0 1690 aaKnown RBP0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 ABCA8O94911 1581 aa0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 COX6B2Q6YFQ2 88 aa0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 MAP3K1Q13233 1512 aa0.12□□□□□ -2.39
RNU6-488P-201ENST00000515918 MDN1Q9NU22 5596 aa0.11□□□□□ -2.39
RNU6-488P-201ENST00000515918 A0A087WXM4 84 aa0.11□□□□□ -2.39
RNU6-488P-201ENST00000515918 NREPQ16612 68 aa0.11□□□□□ -2.39
RNU6-488P-201ENST00000515918 CHD8Q9HCK8 2581 aa0.11□□□□□ -2.39
RNU6-488P-201ENST00000515918 ANKARQ7Z5J8 1434 aa0.11□□□□□ -2.39
RNU6-488P-201ENST00000515918 CCDC88BA6NC98 1476 aa0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 CD163L1Q9NR16 1453 aa0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 M0R2T5 61 aa0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 HMGA1P17096 107 aaKnown RBP0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 IFI27P40305 119 aaPredicted RBP0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 MUC5ACP98088 5654 aa0.1□□□□□ -2.39
RNU6-488P-201ENST00000515918 PTPN23Q9H3S7 1636 aa0.09□□□□□ -2.39
RNU6-488P-201ENST00000515918 REV3LO60673 3130 aa0.09□□□□□ -2.39
RNU6-488P-201ENST00000515918 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
RNU6-488P-201ENST00000515918 NESP48681 1621 aa0.09□□□□□ -2.4
RNU6-488P-201ENST00000515918 CNOT1A5YKK6 2376 aaKnown RBP0.09□□□□□ -2.4
RNU6-488P-201ENST00000515918 SCN11AQ9UI33 1791 aa0.06□□□□□ -2.4
RNU6-488P-201ENST00000515918 NDUFA4O00483 81 aa0.06□□□□□ -2.4
RNU6-488P-201ENST00000515918 C4AP0C0L4 1744 aa0.06□□□□□ -2.4
RNU6-488P-201ENST00000515918 C4BP0C0L5 1744 aa0.06□□□□□ -2.4
RNU6-488P-201ENST00000515918 FLNCQ14315 2725 aa0.06□□□□□ -2.4
RNU6-488P-201ENST00000515918 CFAP43Q8NDM7 1665 aa0.05□□□□□ -2.4
RNU6-488P-201ENST00000515918 HECTD4Q9Y4D8 3996 aa0.05□□□□□ -2.4
RNU6-488P-201ENST00000515918 MAP1BP46821 2468 aaKnown RBP0.05□□□□□ -2.4
RNU6-488P-201ENST00000515918 LRRIQ1Q96JM4 1722 aa0.04□□□□□ -2.4
RNU6-488P-201ENST00000515918 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
RNU6-488P-201ENST00000515918 KNL1Q8NG31 2342 aa0.04□□□□□ -2.4
RNU6-488P-201ENST00000515918 KMT2DO14686 5537 aa0.03□□□□□ -2.4
RNU6-488P-201ENST00000515918 PLCH1Q4KWH8 1693 aa0.03□□□□□ -2.4
RNU6-488P-201ENST00000515918 DEFB135Q30KP9 77 aa0.03□□□□□ -2.4
RNU6-488P-201ENST00000515918 ADAMTS12P58397 1594 aa0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 RICTORQ6R327 1708 aa0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 WNK1Q9H4A3 2382 aa0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 CICQ96RK0 1608 aaPredicted RBP0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 LRP2P98164 4655 aa0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 PRO3102Q9H379 93 aa0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 ANKRD50Q9ULJ7 1429 aa0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 IQGAP3Q86VI3 1631 aa0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 SPRR2BP35325 72 aa0□□□□□ -2.41
RNU6-488P-201ENST00000515918 EIF2AK4Q9P2K8 1649 aaKnown RBP0□□□□□ -2.41
RNU6-488P-201ENST00000515918 SETXQ7Z333 2677 aaKnown RBP-0□□□□□ -2.41
RNU6-488P-201ENST00000515918 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 WIZO95785 1651 aa-0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
RNU6-488P-201ENST00000515918 PLXNC1O60486 1568 aa-0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 H0YAA0 97 aa-0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 LINC00158P58513 81 aa-0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 APC2O95996 2303 aa-0.02□□□□□ -2.41
RNU6-488P-201ENST00000515918 LMTK2Q8IWU2 1503 aa-0.03□□□□□ -2.41
RNU6-488P-201ENST00000515918 UGGT2Q9NYU1 1516 aa-0.03□□□□□ -2.41
RNU6-488P-201ENST00000515918 C3orf79P0CE67 100 aa-0.03□□□□□ -2.41
RNU6-488P-201ENST00000515918 H3BVH4 76 aa-0.04□□□□□ -2.42
RNU6-488P-201ENST00000515918 DEFA5Q01523 94 aa-0.04□□□□□ -2.42
RNU6-488P-201ENST00000515918 SMCO4Q9NRQ5 59 aa-0.05□□□□□ -2.42
RNU6-488P-201ENST00000515918 ACANP16112 2415 aa-0.05□□□□□ -2.42
RNU6-488P-201ENST00000515918 DDX60LQ5H9U9 1706 aaKnown RBP-0.06□□□□□ -2.42
RNU6-488P-201ENST00000515918 NSD1Q96L73 2696 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-488P-201ENST00000515918 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
RNU6-488P-201ENST00000515918 DIP2AQ14689 1571 aa-0.07□□□□□ -2.42
RNU6-488P-201ENST00000515918 CDC42BPGQ6DT37 1551 aa-0.07□□□□□ -2.42
RNU6-488P-201ENST00000515918 DEPDC5O75140 1603 aa-0.08□□□□□ -2.42
RNU6-488P-201ENST00000515918 HILPDAQ9Y5L2 63 aa-0.08□□□□□ -2.42
RNU6-488P-201ENST00000515918 PCNX1Q96RV3 2341 aa-0.08□□□□□ -2.42
RNU6-488P-201ENST00000515918 TRANK1O15050 2925 aa-0.08□□□□□ -2.42
RNU6-488P-201ENST00000515918 RALGAPBQ86X10 1494 aa-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 PARP4Q9UKK3 1724 aaKnown RBP-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 ENHOQ6UWT2 76 aa-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 KCNQ1DNQ9H478 68 aa-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 DUOX2Q9NRD8 1548 aa-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
RNU6-488P-201ENST00000515918 COL6A3P12111 3177 aa-0.1□□□□□ -2.42
RNU6-488P-201ENST00000515918 HFM1A2PYH4 1435 aa-0.1□□□□□ -2.43
RNU6-488P-201ENST00000515918 PDE4DIPQ5VU43 2346 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms