RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 HERV-K104P63124 156 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 MEIG1Q5JSS6 88 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 FAM222AQ5U5X8 452 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 Q6ZRU5 148 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 LINC00643Q86TS7 51 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 SMIM20Q8N5G0 67 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 NDUFA12Q9UI09 145 aa3.43□□□□□ -1.86
GYPB-212ENST00000511198 IGHV1OR15-1A0A075B7D0 117 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 A0A0J9YXV3 536 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 A0A1B0GX51 115 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 UQCRQO14949 82 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 NDUFA1O15239 70 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 TRACP01848 142 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 CIRBPQ14011 172 aaKnown RBP3.42□□□□□ -1.86
GYPB-212ENST00000511198 UNQ9165/PRO28630Q6UXU0 137 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 VSIG2Q96IQ7 327 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 DNAJC30Q96LL9 226 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 LINC01587Q99440 93 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 RHPN1-AS1Q9BWJ2 59 aa3.42□□□□□ -1.86
GYPB-212ENST00000511198 DAZ1Q9NQZ3 744 aaKnown RBP3.42□□□□□ -1.86
GYPB-212ENST00000511198 FAM236AA0A1B0GUQ0 79 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 FAM236BA0A1B0GV22 79 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 COX7A2LO14548 114 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 FAM74A4Q5TZK3 123 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 SDIM1Q6ZPB5 146 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 DAND5Q8N907 189 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 DCANP1Q8TF63 244 aa3.41□□□□□ -1.86
GYPB-212ENST00000511198 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 TRAV12-3A0A0B4J271 114 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 F6UB75 175 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 SPART-AS1P0CW21 52 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.87
GYPB-212ENST00000511198 SNRPD3P62318 126 aaKnown RBP3.4□□□□□ -1.87
GYPB-212ENST00000511198 C9orf153Q5TBE3 101 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 LINC00526Q96FQ7 95 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
GYPB-212ENST00000511198 J3KT08 172 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 ATOX1O00244 68 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 COX7CP15954 63 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
GYPB-212ENST00000511198 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 CIRBP-AS1Q8TBR5 109 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 SPXQ9BT56 116 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 UBE2D4Q9Y2X8 147 aa3.39□□□□□ -1.87
GYPB-212ENST00000511198 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 A8MTW9 85 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 K7EQG2 157 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 CRYGAP11844 174 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 DEFB1P60022 68 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 RPS28P62857 69 aaKnown RBP3.38□□□□□ -1.87
GYPB-212ENST00000511198 HERVK_113P63121 156 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 LINC00308Q8TCZ7 52 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 UPK3BQ9BT76 320 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
GYPB-212ENST00000511198 TRAV13-2A0A0B4J235 113 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 LRCOL1A6NCL2 159 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 TMEM258P61165 79 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 DAZ2Q13117 558 aaKnown RBP3.37□□□□□ -1.87
GYPB-212ENST00000511198 ESRGQ1W209 222 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 C5orf47Q569G3 176 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 Q6JHZ5 121 aa3.37□□□□□ -1.87
GYPB-212ENST00000511198 DAZ4Q86SG3 579 aaKnown RBP3.37□□□□□ -1.87
GYPB-212ENST00000511198 DAZ3Q9NR90 486 aaKnown RBP3.37□□□□□ -1.87
GYPB-212ENST00000511198 IGKV3-7A0A075B6H7 116 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 RPL37AP8A6NKH3 93 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 IGHV3-53P01767 116 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
GYPB-212ENST00000511198 SPINK13Q1W4C9 94 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 SMCR5Q8TEV8 140 aa3.36□□□□□ -1.87
GYPB-212ENST00000511198 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
GYPB-212ENST00000511198 TRAV12-2A0A075B6T6 113 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 H0YGX0 51 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 DNAL4O96015 105 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 CRPP02741 224 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 BAALC-AS2P0C853 105 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 NPC2P61916 151 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
GYPB-212ENST00000511198 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
GYPB-212ENST00000511198 CDKN2A-AS1Q9UH64 79 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
GYPB-212ENST00000511198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
GYPB-212ENST00000511198 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
GYPB-212ENST00000511198 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 NDUFC2-KCTD14E9PQ53 114 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 LINC00694P0DN24 101 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 Q8N814 137 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
GYPB-212ENST00000511198 IGHV3OR16-12A0A075B7B8 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms