RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 DEFB1P60022 68 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 MT1XP80297 61 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 KRTAP20-1Q3LI63 56 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 TRANK1O15050 2925 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 PAPPA2Q9BXP8 1791 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 DNAJC13O75165 2243 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 DNAH1Q9P2D7 4330 aa-0.42□□□□□ -2.48
PHC3-216ENST00000497171 BPTFQ12830 3046 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 ZFYVE16Q7Z3T8 1539 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 MYO9AB2RTY4 2548 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 TLN1Q9Y490 2541 aaKnown RBP-0.43□□□□□ -2.48
PHC3-216ENST00000497171 MT1BP07438 61 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 TRGV9Q99603 122 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 TCEAL7Q9BRU2 100 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 CSMD1Q96PZ7 3565 aa-0.43□□□□□ -2.48
PHC3-216ENST00000497171 TRIOO75962 3097 aa-0.44□□□□□ -2.48
PHC3-216ENST00000497171 SMG1Q96Q15 3661 aaKnown RBP-0.44□□□□□ -2.48
PHC3-216ENST00000497171 H1FX-AS1Q4G0G2 97 aa-0.44□□□□□ -2.48
PHC3-216ENST00000497171 EDC4Q6P2E9 1401 aaKnown RBP-0.45□□□□□ -2.48
PHC3-216ENST00000497171 NCOA3Q9Y6Q9 1424 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 ADGRG4Q8IZF6 3080 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 PRUNE2Q8WUY3 3088 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 PKD1P98161 4303 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 H3BNG1 76 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 ATOX1O00244 68 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 MT2AP02795 61 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 MT-ATP8P03928 68 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 MT1EP04732 61 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 ARMS2P0C7Q2 107 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 MT1MQ8N339 61 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 C14orf144Q96I85 54 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 CMYA5Q8N3K9 4069 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 FAM186AA6NE01 2351 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 APOBP04114 4563 aaKnown RBP-0.45□□□□□ -2.48
PHC3-216ENST00000497171 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 FREM2Q5SZK8 3169 aa-0.45□□□□□ -2.48
PHC3-216ENST00000497171 ANKRD50Q9ULJ7 1429 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 NKTRP30414 1462 aaKnown RBP-0.46□□□□□ -2.48
PHC3-216ENST00000497171 TRAV30A0A087WSZ9 112 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 ATP6V1G2-DDX39BF2Z307 99 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 H7BZZ5 65 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 CCL22O00626 93 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 MT1LQ93083 61 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 TARBP1Q13395 1621 aaKnown RBP-0.46□□□□□ -2.48
PHC3-216ENST00000497171 DNAH9Q9NYC9 4486 aa-0.46□□□□□ -2.48
PHC3-216ENST00000497171 ATMQ13315 3056 aa-0.47□□□□□ -2.48
PHC3-216ENST00000497171 VPS13BQ7Z7G8 4022 aa-0.47□□□□□ -2.48
PHC3-216ENST00000497171 H0YAA0 97 aa-0.47□□□□□ -2.48
PHC3-216ENST00000497171 COL5A1-AS1Q5SY13 56 aa-0.47□□□□□ -2.48
PHC3-216ENST00000497171 ANKRD36A6QL64 1941 aa-0.47□□□□□ -2.48
PHC3-216ENST00000497171 ANKRD36BQ8N2N9 1353 aa-0.47□□□□□ -2.49
PHC3-216ENST00000497171 PRDM15P57071 1507 aaPredicted RBP-0.48□□□□□ -2.49
PHC3-216ENST00000497171 C5orf42Q9H799 3197 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 SPTAN1Q13813 2472 aaKnown RBP-0.48□□□□□ -2.49
PHC3-216ENST00000497171 DYNC1H1Q14204 4646 aaKnown RBP-0.48□□□□□ -2.49
PHC3-216ENST00000497171 MPC2O95563 127 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 MT1GP13640 62 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 CLPSL2Q6UWE3 100 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 COX6B2Q6YFQ2 88 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 SERP2Q8N6R1 65 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 MON2Q7Z3U7 1717 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 SPENQ96T58 3664 aaKnown RBP-0.48□□□□□ -2.49
PHC3-216ENST00000497171 LYSTQ99698 3801 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 RAPGEF2Q9Y4G8 1499 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 DNAH11Q96DT5 4516 aa-0.48□□□□□ -2.49
PHC3-216ENST00000497171 CFAP54Q96N23 3096 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 LRRC37AA6NMS7 1700 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 TRBV7-7A0A0K0K1E9 115 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 SPTY2D1-AS1A0A0U1RR47 76 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 LINC00032P0C843 101 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 FAUP35544 74 aaKnown RBP-0.49□□□□□ -2.49
PHC3-216ENST00000497171 RBP2P50120 134 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 NMSQ5H8A3 153 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 HEPN1Q6WQI6 88 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 CDKN2A-AS1Q9UH64 79 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 TROQ12816 1431 aaPredicted RBP-0.49□□□□□ -2.49
PHC3-216ENST00000497171 ABCC10Q5T3U5 1492 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 SLIT1O75093 1534 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 SHPRHQ149N8 1683 aa-0.49□□□□□ -2.49
PHC3-216ENST00000497171 UQCRHLA0A096LP55 91 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 LEPROTL1O95214 131 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 ETDBQ3ZM63 59 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 ZNF720Q7Z2F6 126 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 MRPL34Q9BQ48 92 aaKnown RBP-0.5□□□□□ -2.49
PHC3-216ENST00000497171 ABCC2Q92887 1545 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 C5P01031 1676 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 CSMD2Q7Z408 3487 aa-0.5□□□□□ -2.49
PHC3-216ENST00000497171 CENPEQ02224 2701 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 D6R8Y8 96 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 CLIP1P30622 1438 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 CUX1P39880 1505 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 RANBP2P49792 3224 aaKnown RBP-0.51□□□□□ -2.49
PHC3-216ENST00000497171 COL14A1Q05707 1796 aaKnown RBP-0.51□□□□□ -2.49
PHC3-216ENST00000497171 MUSTN1Q8IVN3 82 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 FYCO1Q9BQS8 1478 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 CNTLNQ9NXG0 1405 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 PSENENQ9NZ42 101 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 HIGD1BQ9P298 99 aa-0.51□□□□□ -2.49
PHC3-216ENST00000497171 ZFHX4Q86UP3 3567 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms