RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 PLXNA2O75051 1894 aa3.46□□□□□ -1.86
PALMD-202ENST00000496843 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
PALMD-202ENST00000496843 U3KQA8 63 aa3.46□□□□□ -1.86
PALMD-202ENST00000496843 PTPN13Q12923 2485 aa3.46□□□□□ -1.86
PALMD-202ENST00000496843 CNBPP62633 177 aaKnown RBP3.46□□□□□ -1.86
PALMD-202ENST00000496843 ACANP16112 2415 aa3.46□□□□□ -1.86
PALMD-202ENST00000496843 ANKHD1Q8IWZ3 2542 aaKnown RBP3.46□□□□□ -1.86
PALMD-202ENST00000496843 ZNF861PO60384 105 aa3.45□□□□□ -1.86
PALMD-202ENST00000496843 CASC10Q5T4H9 136 aa3.45□□□□□ -1.86
PALMD-202ENST00000496843 PTPRBP23467 1997 aa3.45□□□□□ -1.86
PALMD-202ENST00000496843 WISP2O76076 250 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 BRWD3Q6RI45 1802 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 Q8NDZ9 215 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 RIF1Q5UIP0 2472 aaKnown RBP3.44□□□□□ -1.86
PALMD-202ENST00000496843 ADAMTS9Q9P2N4 1935 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 CCDC168Q8NDH2 2452 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 TCF20Q9UGU0 1960 aaKnown RBP3.44□□□□□ -1.86
PALMD-202ENST00000496843 NCOR2Q9Y618 2525 aa3.44□□□□□ -1.86
PALMD-202ENST00000496843 FN1P02751 2386 aaKnown RBP3.43□□□□□ -1.86
PALMD-202ENST00000496843 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
PALMD-202ENST00000496843 S4R3F8 94 aa3.43□□□□□ -1.86
PALMD-202ENST00000496843 LRRK2Q5S007 2527 aa3.43□□□□□ -1.86
PALMD-202ENST00000496843 TLN2Q9Y4G6 2542 aa3.43□□□□□ -1.86
PALMD-202ENST00000496843 ZCCHC13Q8WW36 166 aaKnown RBP3.43□□□□□ -1.86
PALMD-202ENST00000496843 TNS1Q9HBL0 1735 aaKnown RBP3.43□□□□□ -1.86
PALMD-202ENST00000496843 ITGB4P16144 1822 aa3.42□□□□□ -1.86
PALMD-202ENST00000496843 NUP210Q8TEM1 1887 aaPredicted RBP3.42□□□□□ -1.86
PALMD-202ENST00000496843 A8MUU9 505 aa3.42□□□□□ -1.86
PALMD-202ENST00000496843 KIAA1671Q9BY89 1806 aa3.41□□□□□ -1.86
PALMD-202ENST00000496843 Q5W150 140 aa3.4□□□□□ -1.86
PALMD-202ENST00000496843 PLXNB3Q9ULL4 1909 aa3.4□□□□□ -1.87
PALMD-202ENST00000496843 COL5A3P25940 1745 aaPredicted RBP3.39□□□□□ -1.87
PALMD-202ENST00000496843 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
PALMD-202ENST00000496843 POLQO75417 2590 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 M0QZ58 72 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 Q6ZSA8 131 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 COL18A1P39060 1754 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 ARID2Q68CP9 1835 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 NBDYA0A0U1RRE5 68 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 PANO1I0J062 215 aa3.38□□□□□ -1.87
PALMD-202ENST00000496843 KIAA1549LQ6ZVL6 1849 aa3.37□□□□□ -1.87
PALMD-202ENST00000496843 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
PALMD-202ENST00000496843 COL5A1P20908 1838 aaPredicted RBP3.37□□□□□ -1.87
PALMD-202ENST00000496843 TANC1Q9C0D5 1861 aa3.37□□□□□ -1.87
PALMD-202ENST00000496843 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
PALMD-202ENST00000496843 PLXNA1Q9UIW2 1896 aa3.36□□□□□ -1.87
PALMD-202ENST00000496843 FNDC1Q4ZHG4 1894 aaPredicted RBP3.36□□□□□ -1.87
PALMD-202ENST00000496843 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
PALMD-202ENST00000496843 ADAMTSL1Q8N6G6 1762 aa3.33□□□□□ -1.88
PALMD-202ENST00000496843 A8MU10 97 aa3.33□□□□□ -1.88
PALMD-202ENST00000496843 A0A096LNT2 108 aa3.32□□□□□ -1.88
PALMD-202ENST00000496843 KRTAP4-16G5E9R7 235 aaPredicted RBP3.32□□□□□ -1.88
PALMD-202ENST00000496843 PTPRSQ13332 1948 aa3.32□□□□□ -1.88
PALMD-202ENST00000496843 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
PALMD-202ENST00000496843 PIEZO1Q92508 2521 aa3.31□□□□□ -1.88
PALMD-202ENST00000496843 CR1P17927 2039 aa3.31□□□□□ -1.88
PALMD-202ENST00000496843 ZFYVE26Q68DK2 2539 aa3.31□□□□□ -1.88
PALMD-202ENST00000496843 LTBP1Q14766 1721 aa3.31□□□□□ -1.88
PALMD-202ENST00000496843 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.3□□□□□ -1.88
PALMD-202ENST00000496843 RAI1Q7Z5J4 1906 aaPredicted RBP3.3□□□□□ -1.88
PALMD-202ENST00000496843 A0A1W2PPR1 153 aa3.3□□□□□ -1.88
PALMD-202ENST00000496843 DMBT1Q9UGM3 2413 aaPredicted RBP3.29□□□□□ -1.88
PALMD-202ENST00000496843 M0R2T5 61 aa3.29□□□□□ -1.88
PALMD-202ENST00000496843 COL4A3Q01955 1670 aa3.29□□□□□ -1.88
PALMD-202ENST00000496843 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.88
PALMD-202ENST00000496843 ADAMTS20P59510 1910 aa3.28□□□□□ -1.89
PALMD-202ENST00000496843 WDR90Q96KV7 1748 aa3.27□□□□□ -1.89
PALMD-202ENST00000496843 P0C880 135 aa3.27□□□□□ -1.89
PALMD-202ENST00000496843 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
PALMD-202ENST00000496843 LRP4O75096 1905 aa3.26□□□□□ -1.89
PALMD-202ENST00000496843 ABCA12Q86UK0 2595 aa3.26□□□□□ -1.89
PALMD-202ENST00000496843 MUC6Q6W4X9 2439 aa3.25□□□□□ -1.89
PALMD-202ENST00000496843 TNP1P09430 55 aa3.24□□□□□ -1.89
PALMD-202ENST00000496843 TLN1Q9Y490 2541 aaKnown RBP3.24□□□□□ -1.89
PALMD-202ENST00000496843 CPAMD8Q8IZJ3 1885 aa3.24□□□□□ -1.89
PALMD-202ENST00000496843 KRTAP29-1A8MX34 341 aaPredicted RBP3.24□□□□□ -1.89
PALMD-202ENST00000496843 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
PALMD-202ENST00000496843 A0A087WTM6 91 aa3.23□□□□□ -1.89
PALMD-202ENST00000496843 C10orf142B7Z368 130 aa3.22□□□□□ -1.89
PALMD-202ENST00000496843 SPRR1BP22528 89 aa3.22□□□□□ -1.89
PALMD-202ENST00000496843 K7EIL1 84 aa3.22□□□□□ -1.89
PALMD-202ENST00000496843 KRTAP24-1Q3LI83 254 aa3.21□□□□□ -1.89
PALMD-202ENST00000496843 LCE6AA0A183 80 aa3.21□□□□□ -1.9
PALMD-202ENST00000496843 SPRR1AP35321 89 aa3.2□□□□□ -1.9
PALMD-202ENST00000496843 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
PALMD-202ENST00000496843 THSD7BQ9C0I4 1608 aa3.18□□□□□ -1.9
PALMD-202ENST00000496843 EPG5Q9HCE0 2579 aa3.17□□□□□ -1.9
PALMD-202ENST00000496843 SPTBN4Q9H254 2564 aa3.16□□□□□ -1.9
PALMD-202ENST00000496843 SMR3AQ99954 134 aa3.15□□□□□ -1.9
PALMD-202ENST00000496843 COL11A2P13942 1736 aaPredicted RBP3.14□□□□□ -1.91
PALMD-202ENST00000496843 USP9XQ93008 2570 aaPredicted RBP3.13□□□□□ -1.91
PALMD-202ENST00000496843 MTORP42345 2549 aa3.13□□□□□ -1.91
PALMD-202ENST00000496843 KRTAP10-8P60410 259 aa3.13□□□□□ -1.91
PALMD-202ENST00000496843 JMJD1CQ15652 2540 aa3.12□□□□□ -1.91
PALMD-202ENST00000496843 COL4A6Q14031 1691 aa3.12□□□□□ -1.91
PALMD-202ENST00000496843 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
PALMD-202ENST00000496843 WWC2-AS2Q96NR7 200 aa3.11□□□□□ -1.91
PALMD-202ENST00000496843 KRTAP10-9P60411 292 aa3.09□□□□□ -1.91
PALMD-202ENST00000496843 COL4A1P02462 1669 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 241.8 ms