RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FMN2Q9NZ56 1722 aa0.77□□□□□ -2.29
LAPTM4A-202ENST00000483117 GOLGA4Q13439 2230 aaKnown RBP0.76□□□□□ -2.29
LAPTM4A-202ENST00000483117 TNRC6CQ9HCJ0 1690 aaKnown RBP0.76□□□□□ -2.29
LAPTM4A-202ENST00000483117 RNF17Q9BXT8 1623 aaKnown RBP0.76□□□□□ -2.29
LAPTM4A-202ENST00000483117 ETDCA0A1B0GVM5 59 aa0.76□□□□□ -2.29
LAPTM4A-202ENST00000483117 CDKN2A-AS1Q9UH64 79 aa0.76□□□□□ -2.29
LAPTM4A-202ENST00000483117 DDX60LQ5H9U9 1706 aaKnown RBP0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 CPS1P31327 1500 aa0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 SPINK4O60575 86 aa0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 SPRR1AP35321 89 aa0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 NMES1Q9C002 83 aa0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 C3P01024 1663 aa0.75□□□□□ -2.29
LAPTM4A-202ENST00000483117 ASH1LQ9NR48 2969 aaKnown RBP0.74□□□□□ -2.29
LAPTM4A-202ENST00000483117 DEFB105AQ8NG35 78 aa0.74□□□□□ -2.29
LAPTM4A-202ENST00000483117 LY75O60449 1722 aa0.74□□□□□ -2.29
LAPTM4A-202ENST00000483117 URB1O60287 2271 aaKnown RBP0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 SPRR1BP22528 89 aa0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 A0A0C4DFX4 3053 aa0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 ADCY10Q96PN6 1610 aa0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 GLI2P10070 1586 aa0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 CLASP1Q7Z460 1538 aa0.73□□□□□ -2.29
LAPTM4A-202ENST00000483117 CROCC2H7BZ55 1655 aa0.72□□□□□ -2.29
LAPTM4A-202ENST00000483117 DEPDC5O75140 1603 aa0.72□□□□□ -2.29
LAPTM4A-202ENST00000483117 NCBP2-AS2Q69YL0 99 aa0.72□□□□□ -2.29
LAPTM4A-202ENST00000483117 PRO3102Q9H379 93 aa0.72□□□□□ -2.29
LAPTM4A-202ENST00000483117 TRANK1O15050 2925 aa0.72□□□□□ -2.29
LAPTM4A-202ENST00000483117 CHD8Q9HCK8 2581 aa0.71□□□□□ -2.3
LAPTM4A-202ENST00000483117 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
LAPTM4A-202ENST00000483117 FANCD2Q9BXW9 1451 aa0.71□□□□□ -2.3
LAPTM4A-202ENST00000483117 KIF1AQ12756 1690 aa0.71□□□□□ -2.3
LAPTM4A-202ENST00000483117 TJP1Q07157 1748 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 SNRPGP15A8MWD9 76 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 LYNX1G3V0Z9 82 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 NDUFA3O95167 84 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 FCER1GP30273 86 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 APLNQ9ULZ1 77 aa0.7□□□□□ -2.3
LAPTM4A-202ENST00000483117 PCNTO95613 3336 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 MROH2AA6NES4 1674 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 LINC00158P58513 81 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 FXYD6Q9H0Q3 95 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 UTRNP46939 3433 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 UGGT1Q9NYU2 1555 aa0.69□□□□□ -2.3
LAPTM4A-202ENST00000483117 ZFHX4Q86UP3 3567 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 MAST4O15021 2626 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 USP24Q9UPU5 2620 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 KIAA0586Q9BVV6 1533 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 SETXQ7Z333 2677 aaKnown RBP0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 TNCP24821 2201 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 DNHD1Q96M86 4753 aa0.68□□□□□ -2.3
LAPTM4A-202ENST00000483117 PTPN13Q12923 2485 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 PIEZO2Q9H5I5 2752 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 SZT2Q5T011 3432 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 M0R1W7 72 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 CRIP1P50238 77 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 DEFB109BQ30KR1 87 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 WFDC13Q8IUB5 93 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 CMC2Q9NRP2 79 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 PDE4DIPQ5VU43 2346 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 TNRC18O15417 2968 aaPredicted RBP0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 SPTBN5Q9NRC6 3674 aaKnown RBP0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
LAPTM4A-202ENST00000483117 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 USP9XQ93008 2570 aaPredicted RBP0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 TENM3Q9P273 2699 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 ITSN2Q9NZM3 1697 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 PIEZO1Q92508 2521 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 ZNF462Q96JM2 2506 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 PLNP26678 52 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 PTPRZ1P23471 2315 aaPredicted RBP0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 C4AP0C0L4 1744 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 C4BP0C0L5 1744 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 PCLOQ9Y6V0 5065 aa0.66□□□□□ -2.3
LAPTM4A-202ENST00000483117 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.3
LAPTM4A-202ENST00000483117 PTPRQQ9UMZ3 2332 aa0.65□□□□□ -2.3
LAPTM4A-202ENST00000483117 FASNP49327 2511 aaKnown RBP0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 FLNBO75369 2602 aaKnown RBP0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 H0YGX0 51 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 C2CD3Q4AC94 2353 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 ABCC8Q09428 1581 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.312e-8■■■■■ 67.3
LAPTM4A-202ENST00000483117 COL6A3P12111 3177 aa0.65□□□□□ -2.31
LAPTM4A-202ENST00000483117 SPTBN2O15020 2390 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 EFCAB6Q5THR3 1501 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 ABCA5Q8WWZ7 1642 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 UBR4Q5T4S7 5183 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 H0YAA0 97 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 SPINK1P00995 79 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 TMEM167BQ9NRX6 74 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 CNOT1A5YKK6 2376 aaKnown RBP0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 VCANP13611 3396 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 CHD6Q8TD26 2715 aa0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 TEP1Q99973 2627 aaKnown RBP0.64□□□□□ -2.31
LAPTM4A-202ENST00000483117 LAMA2P24043 3122 aaKnown RBP0.63□□□□□ -2.31
LAPTM4A-202ENST00000483117 PLCE1Q9P212 2302 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms