RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 IFI6P09912 130 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 DEFA5Q01523 94 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 HEPN1Q6WQI6 88 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 FXYD6Q9H0Q3 95 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 NCOR1O75376 2440 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 PTPN13Q12923 2485 aa0.58□□□□□ -2.32
CLTC-204ENST00000472129 POLR1AO95602 1720 aaPredicted RBP0.58□□□□□ -2.32
CLTC-204ENST00000472129 CEP170BQ9Y4F5 1589 aaPredicted RBP0.57□□□□□ -2.32
CLTC-204ENST00000472129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.57□□□□□ -2.321e-8■■□□□ 13.3
CLTC-204ENST00000472129 LCE6AA0A183 80 aa0.57□□□□□ -2.32
CLTC-204ENST00000472129 NREPQ16612 68 aa0.57□□□□□ -2.32
CLTC-204ENST00000472129 APLNQ9ULZ1 77 aa0.57□□□□□ -2.32
CLTC-204ENST00000472129 DUOX2Q9NRD8 1548 aa0.57□□□□□ -2.32
CLTC-204ENST00000472129 PREX1Q8TCU6 1659 aa0.56□□□□□ -2.32
CLTC-204ENST00000472129 UGGT2Q9NYU1 1516 aa0.56□□□□□ -2.32
CLTC-204ENST00000472129 MRPL33O75394 65 aaKnown RBP0.56□□□□□ -2.32
CLTC-204ENST00000472129 C3orf79P0CE67 100 aa0.56□□□□□ -2.32
CLTC-204ENST00000472129 KMT2CQ8NEZ4 4911 aaKnown RBP0.55□□□□□ -2.32
CLTC-204ENST00000472129 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
CLTC-204ENST00000472129 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
CLTC-204ENST00000472129 CFAP43Q8NDM7 1665 aa0.55□□□□□ -2.32
CLTC-204ENST00000472129 ANKHD1Q8IWZ3 2542 aaKnown RBP0.55□□□□□ -2.32
CLTC-204ENST00000472129 IGSF10Q6WRI0 2623 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 CSPG4Q6UVK1 2322 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 NWD1Q149M9 1564 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 ABCA2Q9BZC7 2435 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 USP32Q8NFA0 1604 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 RALGAPBQ86X10 1494 aa0.54□□□□□ -2.32
CLTC-204ENST00000472129 H3BVH4 76 aa0.53□□□□□ -2.32
CLTC-204ENST00000472129 NDUFA4O00483 81 aa0.53□□□□□ -2.32
CLTC-204ENST00000472129 ATXN8Q156A1 80 aa0.53□□□□□ -2.32
CLTC-204ENST00000472129 THOC2Q8NI27 1593 aaKnown RBP0.53□□□□□ -2.33
CLTC-204ENST00000472129 ANK2Q01484 3957 aa0.53□□□□□ -2.33
CLTC-204ENST00000472129 RYR2Q92736 4967 aa0.53□□□□□ -2.33
CLTC-204ENST00000472129 CHD6Q8TD26 2715 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 KRTAP20-1Q3LI63 56 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 ATRQ13535 2644 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 DOT1LQ8TEK3 1739 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 LRRIQ1Q96JM4 1722 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
CLTC-204ENST00000472129 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 SMIM31A0A1B0GVY4 71 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 HFM1A2PYH4 1435 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 H1FX-AS1Q4G0G2 97 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 UBL5Q9BZL1 73 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 CD163L1Q9NR16 1453 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 GNG13Q9P2W3 67 aa0.51□□□□□ -2.33
CLTC-204ENST00000472129 SETD2Q9BYW2 2564 aaPredicted RBP0.51□□□□□ -2.33
CLTC-204ENST00000472129 NESP48681 1621 aa0.5□□□□□ -2.33
CLTC-204ENST00000472129 SETXQ7Z333 2677 aaKnown RBP0.5□□□□□ -2.33
CLTC-204ENST00000472129 LOC730098B7Z3J9 87 aa0.5□□□□□ -2.33
CLTC-204ENST00000472129 PRO3102Q9H379 93 aa0.5□□□□□ -2.33
CLTC-204ENST00000472129 RYR1P21817 5038 aa0.5□□□□□ -2.33
CLTC-204ENST00000472129 SSPOA2VEC9 5147 aa0.5□□□□□ -2.33
CLTC-204ENST00000472129 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
CLTC-204ENST00000472129 LMTK2Q8IWU2 1503 aa0.49□□□□□ -2.33
CLTC-204ENST00000472129 DEFB131BA0A096LNP1 70 aa0.49□□□□□ -2.33
CLTC-204ENST00000472129 DDX60LQ5H9U9 1706 aaKnown RBP0.49□□□□□ -2.33
CLTC-204ENST00000472129 PLCH1Q4KWH8 1693 aa0.49□□□□□ -2.33
CLTC-204ENST00000472129 UBR5O95071 2799 aaPredicted RBP0.49□□□□□ -2.33
CLTC-204ENST00000472129 REV3LO60673 3130 aa0.48□□□□□ -2.33
CLTC-204ENST00000472129 WFDC13Q8IUB5 93 aa0.48□□□□□ -2.33
CLTC-204ENST00000472129 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
CLTC-204ENST00000472129 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
CLTC-204ENST00000472129 KNL1Q8NG31 2342 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 CICQ96RK0 1608 aaPredicted RBP0.47□□□□□ -2.33
CLTC-204ENST00000472129 EIF2AK4Q9P2K8 1649 aaKnown RBP0.47□□□□□ -2.33
CLTC-204ENST00000472129 USP9XQ93008 2570 aaPredicted RBP0.47□□□□□ -2.33
CLTC-204ENST00000472129 A0A087WWC5 75 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 NDUFA3O95167 84 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 KLK9Q2XQG4 91 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 KCNQ1DNQ9H478 68 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 CREBBPQ92793 2442 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 PDE4DIPQ5VU43 2346 aa0.47□□□□□ -2.33
CLTC-204ENST00000472129 NHSQ6T4R5 1651 aa0.46□□□□□ -2.34
CLTC-204ENST00000472129 IQGAP3Q86VI3 1631 aa0.46□□□□□ -2.34
CLTC-204ENST00000472129 EFCAB5A4FU69 1503 aa0.46□□□□□ -2.34
CLTC-204ENST00000472129 ZNF831Q5JPB2 1677 aa0.46□□□□□ -2.34
CLTC-204ENST00000472129 ZC3H13Q5T200 1668 aaKnown RBP0.46□□□□□ -2.34
CLTC-204ENST00000472129 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
CLTC-204ENST00000472129 HERC1Q15751 4861 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 HIVEP3Q5T1R4 2406 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 LINC00158P58513 81 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 DEFB114Q30KQ6 69 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 S100ZQ8WXG8 99 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 DEPDC5O75140 1603 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 MAST4O15021 2626 aa0.45□□□□□ -2.34
CLTC-204ENST00000472129 RICTORQ6R327 1708 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 ERICH3Q5RHP9 1530 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 WNK1Q9H4A3 2382 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 ENHOQ6UWT2 76 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
CLTC-204ENST00000472129 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms