RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 RNF213Q63HN8 5207 aa-0.14□□□□□ -2.43
TM9SF2-202ENST00000463709 LOC730098B7Z3J9 87 aa-0.14□□□□□ -2.43
TM9SF2-202ENST00000463709 TENM2Q9NT68 2774 aa-0.14□□□□□ -2.43
TM9SF2-202ENST00000463709 CLIP1P30622 1438 aa-0.14□□□□□ -2.43
TM9SF2-202ENST00000463709 MAP1BP46821 2468 aaKnown RBP-0.14□□□□□ -2.43
TM9SF2-202ENST00000463709 HECTD4Q9Y4D8 3996 aa-0.15□□□□□ -2.43
TM9SF2-202ENST00000463709 COL12A1Q99715 3063 aa-0.15□□□□□ -2.43
TM9SF2-202ENST00000463709 CEBPZOSA8MTT3 80 aa-0.15□□□□□ -2.43
TM9SF2-202ENST00000463709 UACAQ9BZF9 1416 aa-0.15□□□□□ -2.43
TM9SF2-202ENST00000463709 PKD1L3Q7Z443 1732 aa-0.16□□□□□ -2.43
TM9SF2-202ENST00000463709 UBR4Q5T4S7 5183 aa-0.16□□□□□ -2.43
TM9SF2-202ENST00000463709 DSPP15924 2871 aaKnown RBP-0.16□□□□□ -2.43
TM9SF2-202ENST00000463709 M0R2T5 61 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 CCL22O00626 93 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 KRTAP20-1Q3LI63 56 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 HEPN1Q6WQI6 88 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 RB1CC1Q8TDY2 1594 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 NBEAL1Q6ZS30 2694 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 CREBBPQ92793 2442 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 LRP2P98164 4655 aa-0.16□□□□□ -2.44
TM9SF2-202ENST00000463709 USH2AO75445 5202 aa-0.17□□□□□ -2.44
TM9SF2-202ENST00000463709 RYR1P21817 5038 aa-0.17□□□□□ -2.44
TM9SF2-202ENST00000463709 QSER1Q2KHR3 1735 aa-0.17□□□□□ -2.44
TM9SF2-202ENST00000463709 ABCA13Q86UQ4 5058 aa-0.17□□□□□ -2.44
TM9SF2-202ENST00000463709 WNK1Q9H4A3 2382 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 PPLO60437 1756 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 ACYP1P07311 99 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 SPRR2BP35325 72 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 WFDC13Q8IUB5 93 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 NCOA2Q15596 1464 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 KIF20BQ96Q89 1820 aa-0.18□□□□□ -2.44
TM9SF2-202ENST00000463709 RIF1Q5UIP0 2472 aaKnown RBP-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 DIP2BQ9P265 1576 aa-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 KIAA1109Q2LD37 5005 aa-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 MYO18BQ8IUG5 2567 aa-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 MAP3K4Q9Y6R4 1608 aa-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 CDKN2A-AS1Q9UH64 79 aa-0.19□□□□□ -2.44
TM9SF2-202ENST00000463709 REV3LO60673 3130 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 LRRC9Q6ZRR7 1453 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 FLNAP21333 2647 aaKnown RBP-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 NDUFA3O95167 84 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 WFDC9Q8NEX5 89 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 ST20Q9HBF5 79 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 SETXQ7Z333 2677 aaKnown RBP-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 PDZD2O15018 2839 aa-0.2□□□□□ -2.44
TM9SF2-202ENST00000463709 PREX1Q8TCU6 1659 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 AKAP13Q12802 2813 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 FAT3Q8TDW7 4589 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 ACANP16112 2415 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 TGP01266 2768 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 FASNP49327 2511 aaKnown RBP-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 APC2O95996 2303 aa-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 ANKRD11Q6UB99 2663 aaPredicted RBP-0.21□□□□□ -2.44
TM9SF2-202ENST00000463709 BCORQ6W2J9 1755 aa-0.22□□□□□ -2.44
TM9SF2-202ENST00000463709 USP9YO00507 2555 aaPredicted RBP-0.22□□□□□ -2.44
TM9SF2-202ENST00000463709 KANTRA0A1W2PQU2 76 aa-0.22□□□□□ -2.44
TM9SF2-202ENST00000463709 POLR1AO95602 1720 aaPredicted RBP-0.22□□□□□ -2.44
TM9SF2-202ENST00000463709 SUPT6HQ7KZ85 1726 aaKnown RBP-0.22□□□□□ -2.44
TM9SF2-202ENST00000463709 COL14A1Q05707 1796 aaKnown RBP-0.22□□□□□ -2.45
TM9SF2-202ENST00000463709 EPG5Q9HCE0 2579 aa-0.22□□□□□ -2.45
TM9SF2-202ENST00000463709 ERVK-7P63135 1459 aa-0.22□□□□□ -2.45
TM9SF2-202ENST00000463709 HYDINQ4G0P3 5121 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 USP9XQ93008 2570 aaPredicted RBP-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 DOT1LQ8TEK3 1739 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 IFI6P09912 130 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 HERC1Q15751 4861 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 WDR87Q6ZQQ6 2873 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 DCHS2Q6V1P9 2916 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 UBR3Q6ZT12 1888 aa-0.23□□□□□ -2.45
TM9SF2-202ENST00000463709 EPPK1P58107 5090 aaKnown RBP-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 ITPR2Q14571 2701 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 DEFB135Q30KP9 77 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 DEFB121Q5J5C9 76 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 KNL1Q8NG31 2342 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 CCDC18Q5T9S5 1454 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 ARHGAP35Q9NRY4 1499 aa-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 URB2Q14146 1524 aaKnown RBP-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 LAMA2P24043 3122 aaKnown RBP-0.24□□□□□ -2.45
TM9SF2-202ENST00000463709 H3BUT2 72 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 ADIRFQ15847 76 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 BVES-AS1Q5T3Y7 98 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 S100A13Q99584 98 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 MGAM2Q2M2H8 2515 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 NF1P21359 2839 aa-0.25□□□□□ -2.45
TM9SF2-202ENST00000463709 ITPR1Q14643 2758 aa-0.26□□□□□ -2.45
TM9SF2-202ENST00000463709 FAT1Q14517 4588 aa-0.26□□□□□ -2.45
TM9SF2-202ENST00000463709 COX6B2Q6YFQ2 88 aa-0.26□□□□□ -2.45
TM9SF2-202ENST00000463709 HERC2O95714 4834 aa-0.26□□□□□ -2.45
TM9SF2-202ENST00000463709 PRRC2CQ9Y520 2896 aaKnown RBP-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 TEX15Q9BXT5 2789 aa-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 NDUFB1O75438 58 aa-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 MT4P47944 62 aa-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 RPL38P63173 70 aaKnown RBP-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 ITPR3Q14573 2671 aa-0.27□□□□□ -2.45
TM9SF2-202ENST00000463709 LAMA3Q16787 3333 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms