RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
HERC3-204ENST00000422770 KRTAP11-1Q8IUC1 163 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 ARL17AQ8IVW1 177 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 IGLV5-37A0A075B6J1 123 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 IGKV2-28A0A075B6P5 120 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 IGKV2D-28P01615 120 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 SNHG12Q9BXW3 62 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
HERC3-204ENST00000422770 M0R378 163 aa5.94□□□□□ -1.46
HERC3-204ENST00000422770 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
HERC3-204ENST00000422770 CFC1BP0CG36 223 aa5.94□□□□□ -1.46
HERC3-204ENST00000422770 CFC1P0CG37 223 aa5.94□□□□□ -1.46
HERC3-204ENST00000422770 TRAV13-2A0A0B4J235 113 aa5.93□□□□□ -1.46
HERC3-204ENST00000422770 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
HERC3-204ENST00000422770 TRBV10-2A0A0K0K1G8 114 aa5.93□□□□□ -1.46
HERC3-204ENST00000422770 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
HERC3-204ENST00000422770 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
HERC3-204ENST00000422770 DIRC1Q969H9 104 aa5.92□□□□□ -1.46
HERC3-204ENST00000422770 TRAV23DV6A0A075B6W5 121 aa5.91□□□□□ -1.46
HERC3-204ENST00000422770 TSPAN13O95857 204 aa5.91□□□□□ -1.46
HERC3-204ENST00000422770 NAA38Q9BRA0 125 aaKnown RBP5.91□□□□□ -1.46
HERC3-204ENST00000422770 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
HERC3-204ENST00000422770 PKHD1L1Q86WI1 4243 aa5.91□□□□□ -1.46
HERC3-204ENST00000422770 PRYO14603 147 aa5.9□□□□□ -1.46
HERC3-204ENST00000422770 UBE2AP49459 152 aa5.9□□□□□ -1.46
HERC3-204ENST00000422770 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.46
HERC3-204ENST00000422770 H0Y9J4 135 aa5.89□□□□□ -1.47
HERC3-204ENST00000422770 IGLV6-57P01721 117 aa5.89□□□□□ -1.47
HERC3-204ENST00000422770 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
HERC3-204ENST00000422770 BCE1O60756 84 aa5.88□□□□□ -1.47
HERC3-204ENST00000422770 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
HERC3-204ENST00000422770 PSMB2P49721 201 aa5.88□□□□□ -1.47
HERC3-204ENST00000422770 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
HERC3-204ENST00000422770 SMIM11BQ8TCY0 68 aa5.88□□□□□ -1.47
HERC3-204ENST00000422770 LINC01600Q96MT4 127 aa5.88□□□□□ -1.47
HERC3-204ENST00000422770 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 TAX1BP3O14907 124 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 TRIAP1O43715 76 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 C6orf99Q4VX62 202 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
HERC3-204ENST00000422770 H3BUT2 72 aa5.86□□□□□ -1.47
HERC3-204ENST00000422770 ZNF73O43830 326 aaPredicted RBP5.86□□□□□ -1.47
HERC3-204ENST00000422770 ZNF861PO60384 105 aa5.86□□□□□ -1.47
HERC3-204ENST00000422770 PRLHP81277 87 aa5.85□□□□□ -1.47
HERC3-204ENST00000422770 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
HERC3-204ENST00000422770 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
HERC3-204ENST00000422770 C9orf118A6NHY6 69 aa5.84□□□□□ -1.47
HERC3-204ENST00000422770 LYRM7Q5U5X0 104 aa5.84□□□□□ -1.47
HERC3-204ENST00000422770 COX7BP24311 80 aa5.83□□□□□ -1.48
HERC3-204ENST00000422770 CLEC2BQ92478 149 aa5.83□□□□□ -1.48
HERC3-204ENST00000422770 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
HERC3-204ENST00000422770 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
HERC3-204ENST00000422770 COX6CP09669 75 aa5.82□□□□□ -1.48
HERC3-204ENST00000422770 SCGB1C2P0DMR2 95 aa5.82□□□□□ -1.48
HERC3-204ENST00000422770 ELOF1P60002 83 aaKnown RBP5.82□□□□□ -1.48
HERC3-204ENST00000422770 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
HERC3-204ENST00000422770 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
HERC3-204ENST00000422770 FABP2P12104 132 aa5.81□□□□□ -1.48
HERC3-204ENST00000422770 SPRR1AP35321 89 aa5.81□□□□□ -1.48
HERC3-204ENST00000422770 VAMP3Q15836 100 aa5.81□□□□□ -1.48
HERC3-204ENST00000422770 B5MCH6 92 aa5.8□□□□□ -1.48
HERC3-204ENST00000422770 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
HERC3-204ENST00000422770 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
HERC3-204ENST00000422770 Q6ZRX8 168 aa5.8□□□□□ -1.48
HERC3-204ENST00000422770 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
HERC3-204ENST00000422770 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
HERC3-204ENST00000422770 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
HERC3-204ENST00000422770 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
HERC3-204ENST00000422770 SPCS1Q9Y6A9 102 aa5.79□□□□□ -1.48
HERC3-204ENST00000422770 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
HERC3-204ENST00000422770 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
HERC3-204ENST00000422770 H0YGX0 51 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 SLC25A20O43772 301 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 TCL1BO95988 128 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 CRYGAP11844 174 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 ATXN8Q156A1 80 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 Q9BRP9 147 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
HERC3-204ENST00000422770 A0A1B0GV90 55 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 LST1O00453 97 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 DNAL4O96015 105 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 DHRS4-AS1Q9P1J3 65 aa5.76□□□□□ -1.49
HERC3-204ENST00000422770 A0A087X002 238 aa5.75□□□□□ -1.49
HERC3-204ENST00000422770 K7EP34 96 aa5.75□□□□□ -1.49
HERC3-204ENST00000422770 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
HERC3-204ENST00000422770 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
HERC3-204ENST00000422770 SNCGO76070 127 aa5.74□□□□□ -1.49
HERC3-204ENST00000422770 Q6ZQY7 126 aa5.74□□□□□ -1.49
HERC3-204ENST00000422770 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
HERC3-204ENST00000422770 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
HERC3-204ENST00000422770 TRBV20-1A0A075B6N2 111 aa5.73□□□□□ -1.49
HERC3-204ENST00000422770 TRACP01848 142 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms