RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 KIAA0087Q14695 138 aa7.22□□□□□ -1.25
TFF3-202ENST00000398431 Q1RN00 199 aa7.22□□□□□ -1.25
TFF3-202ENST00000398431 IGLV1-50A0A075B6I6 118 aa7.21□□□□□ -1.26
TFF3-202ENST00000398431 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
TFF3-202ENST00000398431 NDUFA1O15239 70 aa7.21□□□□□ -1.26
TFF3-202ENST00000398431 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
TFF3-202ENST00000398431 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
TFF3-202ENST00000398431 GAGE2EQ4V326 116 aa7.2□□□□□ -1.26
TFF3-202ENST00000398431 FAM19A5Q7Z5A7 132 aaPredicted RBP7.2□□□□□ -1.26
TFF3-202ENST00000398431 GAGE2DQ9UEU5 116 aa7.2□□□□□ -1.26
TFF3-202ENST00000398431 M0QXV9 152 aa7.19□□□□□ -1.26
TFF3-202ENST00000398431 SPINK8P0C7L1 97 aa7.19□□□□□ -1.26
TFF3-202ENST00000398431 HERV-K104P63124 156 aa7.19□□□□□ -1.26
TFF3-202ENST00000398431 SIGMAR1Q99720 223 aa7.19□□□□□ -1.26
TFF3-202ENST00000398431 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
TFF3-202ENST00000398431 TRBV30A0A0K0K1B3 111 aa7.18□□□□□ -1.26
TFF3-202ENST00000398431 SCGB1A1P11684 91 aa7.18□□□□□ -1.26
TFF3-202ENST00000398431 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
TFF3-202ENST00000398431 PPDPFLQ8WWR9 84 aa7.18□□□□□ -1.26
TFF3-202ENST00000398431 MUC2Q02817 5179 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 TCL1BO95988 128 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 PRR4Q16378 134 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 C2orf82Q6UX34 121 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 TEN1Q86WV5 123 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
TFF3-202ENST00000398431 H7C2G1 150 aa7.16□□□□□ -1.26
TFF3-202ENST00000398431 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
TFF3-202ENST00000398431 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
TFF3-202ENST00000398431 PPDPFQ9H3Y8 114 aa7.16□□□□□ -1.26
TFF3-202ENST00000398431 IGLV5-39A0A0G2JS06 123 aa7.15□□□□□ -1.26
TFF3-202ENST00000398431 SMIM1B2RUZ4 78 aa7.15□□□□□ -1.26
TFF3-202ENST00000398431 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.26
TFF3-202ENST00000398431 LITAFQ99732 161 aa7.15□□□□□ -1.26
TFF3-202ENST00000398431 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
TFF3-202ENST00000398431 SLC25A20O43772 301 aa7.14□□□□□ -1.27
TFF3-202ENST00000398431 UBE2BP63146 152 aa7.14□□□□□ -1.27
TFF3-202ENST00000398431 C9JAW5 83 aa7.13□□□□□ -1.27
TFF3-202ENST00000398431 ZNF861PO60384 105 aa7.13□□□□□ -1.27
TFF3-202ENST00000398431 RPL13AP40429 203 aaKnown RBP7.13□□□□□ -1.27
TFF3-202ENST00000398431 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
TFF3-202ENST00000398431 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
TFF3-202ENST00000398431 MTURNQ8N3F0 131 aa7.12□□□□□ -1.27
TFF3-202ENST00000398431 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
TFF3-202ENST00000398431 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
TFF3-202ENST00000398431 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
TFF3-202ENST00000398431 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
TFF3-202ENST00000398431 C22orf24Q9Y442 160 aa7.11□□□□□ -1.27
TFF3-202ENST00000398431 H3BT86 120 aa7.1□□□□□ -1.27
TFF3-202ENST00000398431 TRIAP1O43715 76 aa7.1□□□□□ -1.27
TFF3-202ENST00000398431 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
TFF3-202ENST00000398431 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
TFF3-202ENST00000398431 A0A087X002 238 aa7.09□□□□□ -1.27
TFF3-202ENST00000398431 Q8IZM0 81 aa7.09□□□□□ -1.27
TFF3-202ENST00000398431 COX7B2Q8TF08 81 aa7.09□□□□□ -1.27
TFF3-202ENST00000398431 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
TFF3-202ENST00000398431 NPC2P61916 151 aa7.08□□□□□ -1.28
TFF3-202ENST00000398431 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
TFF3-202ENST00000398431 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
TFF3-202ENST00000398431 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
TFF3-202ENST00000398431 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
TFF3-202ENST00000398431 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
TFF3-202ENST00000398431 LST1O00453 97 aa7.05□□□□□ -1.28
TFF3-202ENST00000398431 CXCL5P42830 114 aa7.05□□□□□ -1.28
TFF3-202ENST00000398431 FAT4Q6V0I7 4981 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 A0A0U1RQV1 116 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 BCE1O60756 84 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 LINC00158P58513 81 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 CKS1BP61024 79 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 DAND5Q8N907 189 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
TFF3-202ENST00000398431 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 A0A1B0GV72 72 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 CRYGAP11844 174 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
TFF3-202ENST00000398431 TYMSOSQ8TAI1 123 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
TFF3-202ENST00000398431 TRACP01848 142 aa7.02□□□□□ -1.29
TFF3-202ENST00000398431 RPL28P46779 137 aaKnown RBP7.02□□□□□ -1.29
TFF3-202ENST00000398431 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 H0YGX0 51 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 ACYP1P07311 99 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 SND1-IT1Q9HBX3 110 aa7.01□□□□□ -1.29
TFF3-202ENST00000398431 SNCGO76070 127 aa7□□□□□ -1.29
TFF3-202ENST00000398431 MIR7-3HGQ8N6C7 128 aa7□□□□□ -1.29
TFF3-202ENST00000398431 CLEC2BQ92478 149 aa7□□□□□ -1.29
TFF3-202ENST00000398431 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
TFF3-202ENST00000398431 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
TFF3-202ENST00000398431 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
TFF3-202ENST00000398431 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
TFF3-202ENST00000398431 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
TFF3-202ENST00000398431 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
TFF3-202ENST00000398431 DNAL4O96015 105 aa6.97□□□□□ -1.29
TFF3-202ENST00000398431 COX17Q14061 63 aa6.97□□□□□ -1.29
TFF3-202ENST00000398431 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
TFF3-202ENST00000398431 MT-ATP8P03928 68 aa6.95□□□□□ -1.3
TFF3-202ENST00000398431 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
TFF3-202ENST00000398431 PFN2P35080 140 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 302.3 ms