RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 CD163L1Q9NR16 1453 aa0.08□□□□□ -2.4
SNORA48.1-201ENST00000390879 DUOX2Q9NRD8 1548 aa0.08□□□□□ -2.4
SNORA48.1-201ENST00000390879 UBR3Q6ZT12 1888 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 PKDREJQ9NTG1 2253 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 UNC79Q9P2D8 2635 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 DEFB131BA0A096LNP1 70 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 MRPL33O75394 65 aaKnown RBP0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 CCDC88BA6NC98 1476 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 LPAP08519 4548 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 LMTK2Q8IWU2 1503 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 UGGT2Q9NYU1 1516 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 PLCE1Q9P212 2302 aa0.07□□□□□ -2.4
SNORA48.1-201ENST00000390879 SPTBN1Q01082 2364 aaKnown RBP0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 NAV2Q8IVL1 2488 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 URB1O60287 2271 aaKnown RBP0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 CRIP1P50238 77 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 QSER1Q2KHR3 1735 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 DOT1LQ8TEK3 1739 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 BCORQ6W2J9 1755 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 ABCA8O94911 1581 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 DIP2AQ14689 1571 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 KIF20BQ96Q89 1820 aa0.06□□□□□ -2.4
SNORA48.1-201ENST00000390879 HFM1A2PYH4 1435 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 RALGAPBQ86X10 1494 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 POLR1AO95602 1720 aaPredicted RBP0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 ETDCA0A1B0GVM5 59 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 DEFB130BP0DP73 79 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 DEFB130AP0DP74 79 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 IAPPP10997 89 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 KCNQ1DNQ9H478 68 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 HUWE1Q7Z6Z7 4374 aaKnown RBP0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 HRNRQ86YZ3 2850 aaPredicted RBP0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 HIVEP3Q5T1R4 2406 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 CICQ96RK0 1608 aaPredicted RBP0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 CACNA1AO00555 2505 aa0.05□□□□□ -2.4
SNORA48.1-201ENST00000390879 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 RGPD8O14715 1765 aaPredicted RBP0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 RGPD5Q99666 1765 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 SPRR2BP35325 72 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 PTPN23Q9H3S7 1636 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 FAT2Q9NYQ8 4349 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 IGF2RP11717 2491 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 COL14A1Q05707 1796 aaKnown RBP0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 ARFGEF2Q9Y6D5 1785 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
SNORA48.1-201ENST00000390879 HSPG2P98160 4391 aa0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 ANKRD36A6QL64 1941 aa0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 DMBT1Q9UGM3 2413 aaPredicted RBP0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 LYNX1G3V0Z9 82 aa0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 LTN1O94822 1766 aa0.03□□□□□ -2.4
SNORA48.1-201ENST00000390879 VWFP04275 2813 aa0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 CELSR1Q9NYQ6 3014 aa0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 CDC42BPGQ6DT37 1551 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 CHD6Q8TD26 2715 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 DOPEY2Q9Y3R5 2298 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 WNK2Q9Y3S1 2297 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 GVINP1Q7Z2Y8 2422 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 FSIP2Q5CZC0 6907 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 HMCN2Q8NDA2 5059 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 LINC01549A6NIU2 74 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 ASXL1Q8IXJ9 1541 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 ADAMTS12P58397 1594 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 NESP48681 1621 aa0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 RICTORQ6R327 1708 aa0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 IQGAP3Q86VI3 1631 aa0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 IGSF10Q6WRI0 2623 aa0□□□□□ -2.41
SNORA48.1-201ENST00000390879 PLXNC1O60486 1568 aa0□□□□□ -2.41
SNORA48.1-201ENST00000390879 KMT2AQ03164 3969 aa0□□□□□ -2.41
SNORA48.1-201ENST00000390879 ABCA2Q9BZC7 2435 aa0□□□□□ -2.41
SNORA48.1-201ENST00000390879 MAST4O15021 2626 aa-0□□□□□ -2.41
SNORA48.1-201ENST00000390879 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 C4AP0C0L4 1744 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 C4BP0C0L5 1744 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 WIZO95785 1651 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 COL7A1Q02388 2944 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 H3BNG1 76 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 MINOS1Q5TGZ0 78 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 DEFB106AQ8N104 65 aa-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 EP300Q09472 2414 aaPredicted RBP-0.01□□□□□ -2.41
SNORA48.1-201ENST00000390879 CFAP43Q8NDM7 1665 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 DEPDC5O75140 1603 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 PRLHP81277 87 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 DEFB114Q30KQ6 69 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 KRTAP6-2Q3LI66 62 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 S100ZQ8WXG8 99 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 S4R3F8 94 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 PRKDCP78527 4128 aaKnown RBP-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 CSPG4Q6UVK1 2322 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 PKD1L1Q8TDX9 2849 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 ATRQ13535 2644 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms