RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 ITSN1Q15811 1721 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 DOT1LQ8TEK3 1739 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.29
GPBP1-202ENST00000309096 SFTA3P0C7M3 94 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 C3orf79P0CE67 100 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 FXYD6Q9H0Q3 95 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 CDKN2A-AS1Q9UH64 79 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 RICTORQ6R327 1708 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 FMN2Q9NZ56 1722 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 MEGF8Q7Z7M0 2845 aa0.77□□□□□ -2.29
GPBP1-202ENST00000309096 ENHOQ6UWT2 76 aa0.76□□□□□ -2.29
GPBP1-202ENST00000309096 DEFB105AQ8NG35 78 aa0.76□□□□□ -2.29
GPBP1-202ENST00000309096 TSC2P49815 1807 aa0.76□□□□□ -2.29
GPBP1-202ENST00000309096 NESP48681 1621 aa0.76□□□□□ -2.29
GPBP1-202ENST00000309096 PARP4Q9UKK3 1724 aaKnown RBP0.75□□□□□ -2.29
GPBP1-202ENST00000309096 SPRR1BP22528 89 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 SPRR1AP35321 89 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 GVINP1Q7Z2Y8 2422 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 DIP2AQ14689 1571 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 TNCP24821 2201 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 TNRC6CQ9HCJ0 1690 aaKnown RBP0.75□□□□□ -2.29
GPBP1-202ENST00000309096 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
GPBP1-202ENST00000309096 EEA1Q15075 1411 aa0.75□□□□□ -2.29
GPBP1-202ENST00000309096 APLNQ9ULZ1 77 aa0.74□□□□□ -2.29
GPBP1-202ENST00000309096 APCP25054 2843 aa0.74□□□□□ -2.29
GPBP1-202ENST00000309096 DDX60LQ5H9U9 1706 aaKnown RBP0.74□□□□□ -2.29
GPBP1-202ENST00000309096 ABCA10Q8WWZ4 1543 aa0.74□□□□□ -2.29
GPBP1-202ENST00000309096 DEFB131BA0A096LNP1 70 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 LINC01549A6NIU2 74 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 SERF2P84101 59 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 DEFB114Q30KQ6 69 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 KCNQ1DNQ9H478 68 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 AKAP6Q13023 2319 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 TPRP12270 2363 aaKnown RBP0.73□□□□□ -2.29
GPBP1-202ENST00000309096 PKDREJQ9NTG1 2253 aa0.73□□□□□ -2.29
GPBP1-202ENST00000309096 ETDCA0A1B0GVM5 59 aa0.72□□□□□ -2.29
GPBP1-202ENST00000309096 SPINK1P00995 79 aa0.72□□□□□ -2.29
GPBP1-202ENST00000309096 PRO3102Q9H379 93 aa0.72□□□□□ -2.29
GPBP1-202ENST00000309096 NRAPQ86VF7 1730 aa0.72□□□□□ -2.29
GPBP1-202ENST00000309096 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
GPBP1-202ENST00000309096 SPTA1P02549 2419 aa0.71□□□□□ -2.3
GPBP1-202ENST00000309096 K7EMI3 77 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 ABCA6Q8N139 1617 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 PLXNC1O60486 1568 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 ZFYVE26Q68DK2 2539 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 NDUFA3O95167 84 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 NCBP2-AS2Q69YL0 99 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 NMES1Q9C002 83 aa0.7□□□□□ -2.3
GPBP1-202ENST00000309096 ABCC6O95255 1503 aa0.69□□□□□ -2.3
GPBP1-202ENST00000309096 PRXQ9BXM0 1461 aa0.69□□□□□ -2.3
GPBP1-202ENST00000309096 CSMD3Q7Z407 3707 aa0.69□□□□□ -2.3
GPBP1-202ENST00000309096 FRAS1Q86XX4 4008 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 PTPN13Q12923 2485 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 C3P01024 1663 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 FCER1GP30273 86 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 LINC00158P58513 81 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 DEPDC5O75140 1603 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 PREX2Q70Z35 1606 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 MAST1Q9Y2H9 1570 aa0.68□□□□□ -2.3
GPBP1-202ENST00000309096 CPS1P31327 1500 aa0.67□□□□□ -2.3
GPBP1-202ENST00000309096 ALS2Q96Q42 1657 aa0.67□□□□□ -2.3
GPBP1-202ENST00000309096 ATRQ13535 2644 aa0.67□□□□□ -2.3
GPBP1-202ENST00000309096 BPTFQ12830 3046 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 RNF17Q9BXT8 1623 aaKnown RBP0.66□□□□□ -2.3
GPBP1-202ENST00000309096 WNK2Q9Y3S1 2297 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 IGF2RP11717 2491 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 TJP1Q07157 1748 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 UNC79Q9P2D8 2635 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 CHD6Q8TD26 2715 aa0.66□□□□□ -2.3
GPBP1-202ENST00000309096 SYCP2Q9BX26 1530 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 C4AP0C0L4 1744 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 C4BP0C0L5 1744 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 TRANK1O15050 2925 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 REV3LO60673 3130 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 LOC730098B7Z3J9 87 aa0.65□□□□□ -2.31
GPBP1-202ENST00000309096 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
GPBP1-202ENST00000309096 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
GPBP1-202ENST00000309096 U3KQA8 63 aa0.64□□□□□ -2.31
GPBP1-202ENST00000309096 LY75O60449 1722 aa0.64□□□□□ -2.31
GPBP1-202ENST00000309096 CROCC2H7BZ55 1655 aa0.64□□□□□ -2.31
GPBP1-202ENST00000309096 ABCA2Q9BZC7 2435 aa0.63□□□□□ -2.31
GPBP1-202ENST00000309096 KIF1AQ12756 1690 aa0.63□□□□□ -2.31
GPBP1-202ENST00000309096 TENM4Q6N022 2769 aa0.63□□□□□ -2.31
GPBP1-202ENST00000309096 KNL1Q8NG31 2342 aa0.63□□□□□ -2.31
GPBP1-202ENST00000309096 NCOR1O75376 2440 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 LYNX1G3V0Z9 82 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 PRH1P02810 166 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 SMR3AQ99954 134 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 PDE4DIPQ5VU43 2346 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 NAV2Q8IVL1 2488 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 UGGT1Q9NYU2 1555 aa0.62□□□□□ -2.31
GPBP1-202ENST00000309096 M0R1W7 72 aa0.61□□□□□ -2.31
GPBP1-202ENST00000309096 CRIP1P50238 77 aa0.61□□□□□ -2.31
GPBP1-202ENST00000309096 LELP1Q5T871 98 aa0.61□□□□□ -2.31
GPBP1-202ENST00000309096 CHD8Q9HCK8 2581 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms