RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NDUFC2-KCTD14E9PQ53 114 aa9.06□□□□□ -0.96
UPK3A-201ENST00000216211 H3BUT2 72 aa9.06□□□□□ -0.96
UPK3A-201ENST00000216211 DAND5Q8N907 189 aa9.06□□□□□ -0.96
UPK3A-201ENST00000216211 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
UPK3A-201ENST00000216211 PRO1854Q9UHT4 67 aa9.05□□□□□ -0.96
UPK3A-201ENST00000216211 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
UPK3A-201ENST00000216211 LINC00158P58513 81 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 COX17Q14061 63 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 VAMP3Q15836 100 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
UPK3A-201ENST00000216211 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
UPK3A-201ENST00000216211 NPC2P61916 151 aa9.03□□□□□ -0.96
UPK3A-201ENST00000216211 MIR7-3HGQ8N6C7 128 aa9.03□□□□□ -0.96
UPK3A-201ENST00000216211 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.97
UPK3A-201ENST00000216211 IGLV1-50A0A075B6I6 118 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 TSPAN13O95857 204 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 FABP2P12104 132 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 PFN2P35080 140 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
UPK3A-201ENST00000216211 XAGE1AQ9HD64 81 aa8.99□□□□□ -0.97
UPK3A-201ENST00000216211 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
UPK3A-201ENST00000216211 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
UPK3A-201ENST00000216211 K7EP34 96 aa8.98□□□□□ -0.97
UPK3A-201ENST00000216211 GTF2H5Q6ZYL4 71 aa8.98□□□□□ -0.97
UPK3A-201ENST00000216211 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
UPK3A-201ENST00000216211 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
UPK3A-201ENST00000216211 ZNF861PO60384 105 aa8.96□□□□□ -0.98
UPK3A-201ENST00000216211 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
UPK3A-201ENST00000216211 LYRM7Q5U5X0 104 aa8.95□□□□□ -0.98
UPK3A-201ENST00000216211 TRAV13-2A0A0B4J235 113 aa8.93□□□□□ -0.98
UPK3A-201ENST00000216211 NDUFC2O95298 119 aa8.93□□□□□ -0.98
UPK3A-201ENST00000216211 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
UPK3A-201ENST00000216211 IGKV2-28A0A075B6P5 120 aa8.92□□□□□ -0.98
UPK3A-201ENST00000216211 H7C2G1 150 aa8.92□□□□□ -0.98
UPK3A-201ENST00000216211 IGKV2D-28P01615 120 aa8.92□□□□□ -0.98
UPK3A-201ENST00000216211 PRR4Q16378 134 aa8.92□□□□□ -0.98
UPK3A-201ENST00000216211 Q1RN00 199 aa8.92□□□□□ -0.98
UPK3A-201ENST00000216211 PSMB2P49721 201 aa8.91□□□□□ -0.98
UPK3A-201ENST00000216211 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
UPK3A-201ENST00000216211 SCGB1C2P0DMR2 95 aa8.9□□□□□ -0.98
UPK3A-201ENST00000216211 LINC00167Q96N53 147 aa8.9□□□□□ -0.98
UPK3A-201ENST00000216211 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
UPK3A-201ENST00000216211 TRIAP1O43715 76 aa8.89□□□□□ -0.99
UPK3A-201ENST00000216211 LINC00337Q8N6G1 96 aa8.89□□□□□ -0.99
UPK3A-201ENST00000216211 BCE1O60756 84 aa8.88□□□□□ -0.99
UPK3A-201ENST00000216211 COX6CP09669 75 aa8.88□□□□□ -0.99
UPK3A-201ENST00000216211 RPL28P46779 137 aaKnown RBP8.88□□□□□ -0.99
UPK3A-201ENST00000216211 A0A087X002 238 aa8.87□□□□□ -0.99
UPK3A-201ENST00000216211 TCL1BO95988 128 aa8.87□□□□□ -0.99
UPK3A-201ENST00000216211 H3BMG7 143 aa8.86□□□□□ -0.99
UPK3A-201ENST00000216211 MUC2Q02817 5179 aa8.86□□□□□ -0.99
UPK3A-201ENST00000216211 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
UPK3A-201ENST00000216211 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
UPK3A-201ENST00000216211 F8W1H4 67 aa8.84□□□□□ -0.99
UPK3A-201ENST00000216211 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
UPK3A-201ENST00000216211 Q8NDZ9 215 aa8.84□□□□□ -0.99
UPK3A-201ENST00000216211 CRYGAP11844 174 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 ATXN8Q156A1 80 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 OR13C6PQ8NH95 151 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 PRO0461Q9UI25 63 aa8.83□□□□□ -1
UPK3A-201ENST00000216211 UBE2AP49459 152 aa8.82□□□□□ -1
UPK3A-201ENST00000216211 TMEM126AQ9H061 195 aa8.82□□□□□ -1
UPK3A-201ENST00000216211 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
UPK3A-201ENST00000216211 LST1O00453 97 aa8.8□□□□□ -1
UPK3A-201ENST00000216211 NCR3O14931 201 aa8.8□□□□□ -1
UPK3A-201ENST00000216211 VPREB1P12018 145 aa8.8□□□□□ -1
UPK3A-201ENST00000216211 H0YGX0 51 aa8.79□□□□□ -1
UPK3A-201ENST00000216211 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
UPK3A-201ENST00000216211 IGLV6-57P01721 117 aa8.78□□□□□ -1
UPK3A-201ENST00000216211 S100A7L2Q5SY68 101 aa8.78□□□□□ -1
UPK3A-201ENST00000216211 CLEC2BQ92478 149 aa8.78□□□□□ -1
UPK3A-201ENST00000216211 M0R378 163 aa8.77□□□□□ -1.01
UPK3A-201ENST00000216211 TRACP01848 142 aa8.76□□□□□ -1.01
UPK3A-201ENST00000216211 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
UPK3A-201ENST00000216211 C9JAW5 83 aa8.75□□□□□ -1.01
UPK3A-201ENST00000216211 PRLHP81277 87 aa8.75□□□□□ -1.01
UPK3A-201ENST00000216211 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
UPK3A-201ENST00000216211 FAM19A1Q7Z5A9 133 aa8.74□□□□□ -1.01
UPK3A-201ENST00000216211 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
UPK3A-201ENST00000216211 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
UPK3A-201ENST00000216211 SLC25A20O43772 301 aa8.73□□□□□ -1.01
UPK3A-201ENST00000216211 FAM218AQ96MZ4 157 aa8.73□□□□□ -1.01
UPK3A-201ENST00000216211 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
UPK3A-201ENST00000216211 CBY1Q9Y3M2 126 aa8.73□□□□□ -1.01
UPK3A-201ENST00000216211 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
UPK3A-201ENST00000216211 A0A1B0GX51 115 aa8.71□□□□□ -1.02
UPK3A-201ENST00000216211 H3BT86 120 aa8.71□□□□□ -1.02
UPK3A-201ENST00000216211 ANKRD29Q8N6D5 301 aa8.71□□□□□ -1.02
UPK3A-201ENST00000216211 MUC17Q685J3 4493 aa8.71□□□□□ -1.02
UPK3A-201ENST00000216211 TRAV23DV6A0A075B6W5 121 aa8.7□□□□□ -1.02
UPK3A-201ENST00000216211 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
UPK3A-201ENST00000216211 TRBV7-6A0A0J9YX20 115 aa8.69□□□□□ -1.02
UPK3A-201ENST00000216211 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms