RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Fbxo25Q9D2Y6 357 aa7.65□□□□□ -1.18
Sh3rf1-202ENSMUST00000209611 Fam208bQ5DTT3 2382 aa7.65□□□□□ -1.18
Sh3rf1-202ENSMUST00000209611 Gm6793B2RXM2 351 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ovol3D3YYM0 189 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Prss32E9Q409 334 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 MgpP19788 104 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Cox19Q8K0C8 92 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Avpi1Q9D7H4 142 aa7.65□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Sertad4A7DTG3 377 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zfp493E9Q1L8 384 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Il3raP26952 396 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 C1qtnf9Q4ZJN1 333 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mlst8Q9DCJ1 326 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav6n-5A0A075B621 112 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav6-5A0A075B6B5 112 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 F930015N05RikQ8C3A3 210 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zfp119aQ9JIC0 545 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv8-2A0A0A6YW58 119 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zfp931A2AHM2 298 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zc2hc1aQ8BJH1 324 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm9958Q8C9U4 106 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 EppinQ9DA01 134 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zfyve26Q5DU37 2529 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Sdk1Q3UH53 2193 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv1-16A0A075B5U1 98 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav4-4-dv10A0A075B651 110 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1024A2ASU7 327 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Rnf212F6TQD1 307 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gng4P50153 75 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ube2g1P62254 170 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr495Q8VF12 330 aa7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Nhp2Q9CRB2 153 aaKnown RBP7.64□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv3-4A0A0A6YXF1 117 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1189A2AV11 306 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ccl1P10146 92 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Edn3P48299 214 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1258Q8VGN6 311 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Rpp25lQ99JH1 163 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Tmem52Q9D702 196 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ociad2Q9D8W7 154 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Sp5Q9JHX2 398 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Dscaml1Q4VA61 2053 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm21913J3KML9 361 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm21776J3QPJ5 361 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gata3P23772 443 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Slc25a5P51881 298 aaKnown RBP7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Prss3Q792Z0 246 aaKnown RBP7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mrps11Q9DCA2 191 aaKnown RBP7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Arpc1aQ9R0Q6 370 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr978E9Q985 311 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr322Q5NCC8 327 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav3-1Q5R1I8 114 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Slc35d2Q762D5 326 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr263Q7TQT8 317 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Eda2rQ8BX35 297 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Pth2Q91W27 100 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Chchd1Q9CQA6 118 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Pkd1l2Q7TN88 2461 aa7.63□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv6-3A0A075B5T2 118 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Q497N7 227 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Q8BG31 207 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Q8C3M9 231 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Dopey2Q3UHQ6 2295 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Foxh1O88621 401 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 P01724 129 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Defa7P50705 93 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mgst1Q91VS7 155 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Pygo1Q9D0P5 417 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Tmem170aQ9D342 144 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Pf4Q9Z126 105 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trbv31A0A075B5J5 111 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv1-20A0A0A6YX66 117 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 P01789 122 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Tmem95P0DJF3 176 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Cd27P41272 250 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 HrkP62816 92 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 V1rd19Q3KNP5 305 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mrpl55Q9CZ83 127 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Sptbn1Q62261 2363 aaKnown RBP7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Zfp950A0A0U1RQ46 609 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr779E9PUS9 130 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Vmn1r149E9PWL6 307 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Vmn1r101E9Q365 307 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Vmn1r158G3UY92 307 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 E130116L18RikQ8BMV6 101 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Tusc5Q8C838 173 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr498Q8VEW2 330 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1243Q8VGM7 305 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mrpl52Q9D0Y8 121 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Lrrk2Q5S006 2527 aa7.62□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Col6a4A2AX52 2309 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Igkv14-130A0A0G2JF45 117 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 P01787 123 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr996Q7TRA0 314 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Igfbpl1Q80W15 270 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Spink10Q8CAC8 162 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Mrpl20Q9CQL4 149 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 AmtnQ9D3J8 213 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm44501A8R0T9 150 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Cd3eP22646 189 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms