RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Sh2d6Q9D413 297 aa11.67□□□□□ -0.54
Syn1-202ENSMUST00000115345 PtprbB2RU80 1998 aa11.67□□□□□ -0.54
Syn1-202ENSMUST00000115345 Trbv17A0A140T8P8 114 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Cxcl13O55038 109 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Ccl22O88430 92 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 PolP10400 120 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Klk1b5P15945 261 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 P18524 117 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 RflnbQ5SVD0 216 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Rs1Q9Z1L4 224 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Cacna1eQ61290 2272 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Myo9bQ9QY06 2114 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Dok2O70469 412 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Med12A2AGH6 2190 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 AsipQ03288 131 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Trav5d-4Q5R1F6 114 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Actl6bQ99MR0 426 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Q9CQM1 111 aa11.66□□□□□ -0.54
Syn1-202ENSMUST00000115345 Hcfc1Q61191 2045 aaKnown RBP11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Rbfox3Q8BIF2 374 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Mbnl3Q8R003 342 aaKnown RBP11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Pip4p2Q9CZX7 257 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Cox20Q9D7J4 117 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Gm20825J3QM67 227 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Gm27021M0QWE2 156 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Ssty2Q149W4 227 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Gm21394Q497R7 227 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Ccl8Q9Z121 97 aa11.65□□□□□ -0.54
Syn1-202ENSMUST00000115345 Ighv2-6A0A075B6A7 116 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Q3U595 105 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Trib3Q8K4K2 354 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tex38A2A8T7 201 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Zfand5O88878 213 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tnfrsf13bQ9ET35 249 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tmem52bQ0VBF2 186 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Trav7-2Q5R1I3 112 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tmem167bQ80X45 74 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Defb22Q8BVC1 179 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm17324Q8C6J8 137 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Olfr1259Q8VEZ1 309 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Sh2d2aQ9QXK9 374 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 Pde4dipQ80YT7 2224 aa11.64□□□□□ -0.55
Syn1-202ENSMUST00000115345 CklfQ9DAS1 152 aa11.63□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ighv14-2A0A075B5R7 117 aa11.63□□□□□ -0.55
Syn1-202ENSMUST00000115345 Cdx4Q07424 282 aa11.63□□□□□ -0.55
Syn1-202ENSMUST00000115345 Prok2Q9QXU7 128 aa11.63□□□□□ -0.55
Syn1-202ENSMUST00000115345 Igkv10-95A0A0G2JFY3 115 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Casp6O08738 276 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Zfp36l2P23949 484 aaKnown RBP11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Lgals4Q8K419 326 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Crybg1A0A0G2JG52 2065 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tcrg-C2A0A075B5Z2 167 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ighv1-18A0A0A6YXN4 117 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Hbb-bsA8DUK4 147 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm28044L7N1X0 119 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 P01853 167 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Hbb-b1P02088 147 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Fam3dP97805 223 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 SbsponQ3UPR9 264 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 CntfrO88507 372 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gpx1P11352 201 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Arrdc5Q497K5 325 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm10309Q8C648 119 aa11.62□□□□□ -0.55
Syn1-202ENSMUST00000115345 Trav6-1A0A075B5Z8 112 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Defa23Q5G866 93 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Wipf1Q8K1I7 493 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ighv8-5A0A0A6YY60 119 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Inafm1E9PV59 130 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 GferP56213 198 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Rnase9P60154 184 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ube2d3P61079 147 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ube2d2P62838 147 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ovol1Q9WTJ2 267 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm5426J3QNM7 103 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 P01789 122 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Ptrh2Q8R2Y8 181 aaKnown RBP11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Nabp2Q8R2Y9 212 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 IcosQ9WVS0 200 aa11.61□□□□□ -0.55
Syn1-202ENSMUST00000115345 Tdrd6P61407 2134 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Wdfy4E9Q2M9 3149 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 A0A1L1SR50 188 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 P01790 122 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm9817Q9D2M0 144 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm5878E9PUB3 99 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Fam53bQ8BGR5 422 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Plppr2Q8VCY8 343 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Plxdc1Q91ZV7 500 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Mustn1Q99JI1 82 aa11.6□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm20604F8WIA3 75 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm20403G3UYB0 123 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Klf14Q19A41 325 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Chac1Q8R3J5 223 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm17359A0A0G2JEB7 487 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Prdx1P35700 199 aaKnown RBP11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Gm5111Q8C9M4 190 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Dock8Q8C147 2100 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 H2al1bA0A087WP11 105 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 H2al1kJ3QP08 105 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 Il13P20109 131 aa11.59□□□□□ -0.55
Syn1-202ENSMUST00000115345 4930518I15RikQ3V2W7 57 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms