RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 CtrlQ9ER05 264 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ccl8Q9Z121 97 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 ApomQ9Z1R3 190 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tcf24V9GWT9 166 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cst7O89098 144 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P04944 107 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Prss3Q792Z0 246 aaKnown RBP10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem129Q8K304 362 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr1271Q8VG62 305 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Spcs1Q9D958 161 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 ArtnQ9Z0L2 224 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ahctf1Q8CJF7 2243 aaKnown RBP10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm28269A0A087WSG3 125 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm5741B2RVA4 72 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 1810011H11RikE9PVZ2 95 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ube2d2bQ6ZWY6 147 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Fam216bQ8CC14 138 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 TdhQ8K3F7 373 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr1454Q8VFW2 307 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ubtd1Q91WB7 227 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 TroQ6DIC6 2087 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tcrg-C1A0A075B5Z0 172 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P0C1Z5 52 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Mamld1P0C6A2 803 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cox7a2P48771 83 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Rpl31P62900 125 aaKnown RBP10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Zmat4Q8BZ94 229 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Muc15Q8C6Z1 331 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmed6Q9CQG0 239 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm12728V9GX31 77 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 CadB2RQC6 2225 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ighv14-3A0A075B5R9 117 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr466E9Q2B9 308 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P01725 110 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P01788 123 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P06323 132 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 CckP09240 115 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm10803Q3TZS6 135 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm16686Q3UMN9 131 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Pmis2Q497Q9 96 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Vwc2Q8C8N3 324 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Znrf1Q91V17 227 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr954Q9EQB6 314 aa10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 CenpeQ6RT24 2474 aaKnown RBP10.67□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cd209gD3Z5D4 194 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Rbp4Q00724 201 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 RprmlQ3URD2 117 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 PpdpfQ9CR37 115 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Nat6Q9R123 314 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ovol1Q9WTJ2 267 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ighv7-2A0A0A6YX91 119 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 AU041133A0A0J9YVH3 498 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gpm6bP35803 328 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tac3P55099 116 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ang4Q3TMQ6 144 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Spata46Q4FZF2 204 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem126aQ9D8Y1 196 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Sec11aQ9R0P6 179 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 AtrxQ61687 2476 aaKnown RBP10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Vmn1r224E9PWK2 298 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Fam3dP97805 223 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Smrp1Q2MH31 260 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr982Q8VGB3 321 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem189Q99LQ7 271 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cbln1Q9R171 193 aa10.66□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cldn34c3J3QJW5 233 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cldn34c2J3QNM1 233 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cxcl13O55038 109 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 TgfaP48030 159 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Pilrb2Q2YFS1 225 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Cldn34c1Q8K193 234 aa10.65□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Q24JP4 165 aa10.65□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Plppr2Q8VCY8 343 aa10.65□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Necap1Q9CR95 275 aa10.65□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Fam241bQ9D882 120 aa10.65□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Tmprss5Q9ER04 455 aa10.65□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Rchy1Q9CR50 261 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Prr30Q9D9B7 401 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 GlrxQ9QUH0 107 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Olfr898L7N1Z5 316 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Slc25a5P51881 298 aaKnown RBP10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 B020031M17RikQ3UT11 173 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Actl6bQ99MR0 426 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Cxcl14Q9WUQ5 99 aa10.64□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Zfp930A0A1D5RM15 441 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Trpt1Q8K3A2 249 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Sec16aA2AIX1 2377 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Amn1B8JKV0 258 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Gm17660B9UIU9 90 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Olfr748E9Q9Z0 307 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 SelplgQ62170 397 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Ubald1Q6P3B2 176 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Snx22Q8C084 192 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 PgpQ8CHP8 321 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Olfr266Q8VFC3 316 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Crybb3Q9JJU9 211 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Trav12d-3A0A075B6A4 115 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Igkv1-132A0A0B4J1H9 120 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 P04219 140 aa10.63□□□□□ -0.71
Prpf38b-201ENSMUST00000029480 Slc35b1P97858 322 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms