RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Fbxl15Q91W61 300 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Immp1lQ9CQU8 166 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Plxna1P70206 1894 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Thsd7bQ6P4U0 1607 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Q4KKZ1 196 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Cfap46E9Q2C0 2641 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ypel3P61237 119 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ssbp2Q9CYZ8 361 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ighv5-6A0A075B5Q0 117 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gm12845A0A0N4SUM5 588 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Trav7-2Q5R1I3 112 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Hapln4Q80WM4 400 aa12.44□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Igkv14-130A0A0G2JF45 117 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Tmem200bD3Z0P8 284 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Zfp248Q640N4 576 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gm6793B2RXM2 351 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Hbb-b2P02089 147 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Olfr1199Q8VF94 310 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Mrpl53Q9D1H8 118 aaKnown RBP12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Rs1Q9Z1L4 224 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ighv1-20A0A0A6YX66 117 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gm6871L7N248 545 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Mgst3Q9CPU4 153 aa12.43□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Tln2Q71LX4 2375 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Cdkn1aP39689 159 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Jsrp1Q3MI48 332 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 BmperQ8CJ69 685 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Defa28D3Z1V9 94 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gm10020E9QAZ2 204 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Defa26Q3L180 93 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Defa25Q5G864 92 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Wipf2Q6PEV3 440 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Rpl15Q9CZM2 204 aaKnown RBP12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Baz2aQ91YE5 1889 aaKnown RBP12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Hist1h1tQ07133 208 aa12.42□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Insl3O09107 122 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Spsb3Q571F5 354 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ncor2Q9WU42 2472 aaKnown RBP12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Sptbn1Q62261 2363 aaKnown RBP12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Nat8b-psE0CYC6 232 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Cdk2ap2Q9CPY4 127 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Mfap4Q9D1H9 257 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Phf3B2RQG2 2025 aaKnown RBP12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ms4a8Q99N10 290 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Obox1Q9D350 204 aa12.41□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Defb33Q30KN3 62 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 SNORCQ9CXL7 121 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Med12lQ8BQM9 2157 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gtf3c1Q8K284 2101 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 NdpP48744 131 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Trav7d-3Q5R1I1 112 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Fam168aQ8BGZ2 244 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Armcx4E9PWM3 2356 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Ighv1-22A0A075B5U7 117 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Rnf144bQ8BKD6 301 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gkn1Q9CR36 201 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 SelenokQ9JLJ1 94 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Trbv31A0A075B5J5 111 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Gm29423A0A087WRM1 55 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 MdfiP70331 251 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Cd33Q63994 403 aa12.4□□□□□ -0.42
Col2a1-201ENSMUST00000023123 Defa4P28311 92 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 P01788 123 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Csrp2P97314 193 aaKnown RBP12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm16686Q3UMN9 131 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Dpm2Q9Z324 84 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm20379A0A087WR34 119 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Egr1P08046 533 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Fxyd7P59648 80 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm5089A1L3C8 106 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Ccl6P27784 116 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Ovol1Q9WTJ2 267 aa12.39□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm10521E9PZK0 135 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Ndufc2Q9CQ54 120 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Tmem190Q9D2E9 166 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm867A0A1W2P7T4 151 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Cxcl13O55038 109 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Sod1P08228 154 aaKnown RBP12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Zfp36P22893 319 aaKnown RBP12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Pde6hP61249 83 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Morn3Q8C5T4 241 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Mcm3apQ9WUU9 1971 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm29666A0A087WQ99 126 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Wfdc9Q3UW41 83 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Znf260Q62513 407 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 COA4Q8BT51 87 aa12.38□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm12169F2Z474 250 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Wnk2Q3UH66 2149 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Igkv4-71A0A0G2JEH0 117 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm11020F6ZGD5 61 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 PolP10400 120 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 TdhQ8K3F7 373 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Ighv8-6A0A0A6YXA3 118 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Gm10767Q3TQP0 103 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 9130213A22RikQ3V3T2 120 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Dock7Q8R1A4 2130 aaKnown RBP12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Nit2Q9JHW2 276 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 Sbf1Q6ZPE2 1867 aa12.37□□□□□ -0.43
Col2a1-201ENSMUST00000023123 BC035044E0CXF8 138 aa12.36□□□□□ -0.43
Col2a1-201ENSMUST00000023123 P01787 123 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 118.6 ms