RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Fgf6P21658 208 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 AdipoqQ60994 247 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ighv14-3A0A075B5R9 117 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Defa30E9QPZ2 93 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 P01791 123 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 MturnQ8CGA4 131 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Chac2Q9CQG1 178 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tcrg-V6A0A075B5Y8 134 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tmem92B7ZWI3 162 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ca2P00920 260 aaKnown RBP13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 TfpiO54819 306 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Fabp6P51162 128 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gm9949Q8C9F4 104 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Trpt1Q8K3A2 249 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 1520401A03RikA0A0J9YVH6 598 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Slc25a17O70579 307 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Olfr311Q5NC59 308 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ifi27Q8C6G0 260 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gm9958Q8C9U4 106 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Olfr1272Q8VGN8 308 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Rnf7Q9WTZ1 113 aa13.29□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ighv1-20A0A0A6YX66 117 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 H2al2bA9Z055 111 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gm28305F6U473 122 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Myo15bI7HPW8 3033 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tm4sf20Q9CQY8 226 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Shisa9Q9CZN4 424 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tnfaip6O08859 275 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 C330021F23RikQ8C7T0 141 aa13.28□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ighv1-37A0A0A6YW32 117 aa13.27□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ppp1r3cQ7TMB3 317 aa13.27□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Fam206aQ80ZQ9 193 aaKnown RBP13.27□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Defa6P50704 93 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 CampP51437 172 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Slc16a4Q8R0M8 500 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ppp1r14aQ91VC7 147 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Rnf185Q91YT2 192 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ormdl3Q9CPZ6 153 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ovol3D3YYM0 189 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Smim13E9Q942 88 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Sigmar1O55242 223 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Lyz1P17897 148 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 MgpP19788 104 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cd3eP22646 189 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 V1rd19Q3KNP5 305 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Defa-rs10Q64263 91 aa13.27□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Neil2Q6R2P8 329 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cmya5Q70KF4 3739 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Hrct1Q9D6B9 109 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm10073E9Q3T0 114 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cox7cP17665 63 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm26566Q8CAC1 153 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Olfr211Q8VGH2 309 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tmem189Q99LQ7 271 aa13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Mrpl53Q9D1H8 118 aaKnown RBP13.26□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tstd1E9PY03 133 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cacng7P62956 275 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Sap30O88574 220 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Rasl10aQ8K5A4 203 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tcf24V9GWT9 166 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Vsig4F6TUL9 280 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Nhlh1Q02576 133 aa13.25□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm10645Q3UPY1 145 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Spcs1Q9D958 161 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ighv1-7A0A075B5T7 117 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 KprpB2RUR4 657 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Olfr877Q8VF62 311 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cml3Q9JIY8 226 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Trav9-1A0A075B601 112 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Rnf5O35445 180 aa13.24□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm28778A0A087WSK7 233 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Slc35d2Q762D5 326 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Awat1A2ADU9 328 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Cnep1r1Q3UJ81 125 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Tctex1d4Q8CDY7 219 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Trav5-1A0A075B5Z7 114 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Vmn1r60G3UY47 300 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm5150Q1AN92 299 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Srsf1Q6PDM2 248 aaKnown RBP13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Muc15Q8C6Z1 331 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ube2tQ9CQ37 204 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ovol1Q9WTJ2 267 aa13.23□□□□□ -0.29
Ctcf-201ENSMUST00000005841 NgfP01139 241 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Rasl11aQ6IMB1 242 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Mcrip2Q9CQB2 160 aaKnown RBP13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Bhlha15Q9QYC3 197 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Wisp2Q9Z0G4 251 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Slc25a20Q9Z2Z6 301 aaKnown RBP13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Trav16d-dv11A0A075B617 117 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Trav16nA0A075B634 117 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 1700084M14RikB1AT01 78 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Q9D131 166 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Obox1Q9D350 204 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Dazap1Q9JII5 406 aaKnown RBP13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Trdv1A0A075B657 112 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 TracA0A075B662 137 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Ighv8-8A0A0A6YXQ0 119 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Gm17359A0A0G2JEB7 487 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Shisal2aA2A9G7 189 aa13.22□□□□□ -0.29
Ctcf-201ENSMUST00000005841 Eda2rQ8BX35 297 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms