RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rpl32-psP17932 135 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Zgrf1Q0VGT4 1863 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Spata46Q4FZF2 204 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Q91WE4 72 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gemin7Q9CWY4 129 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Socs3O35718 225 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Olfr745Q7TRL9 328 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 OtosQ8R448 89 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 AdmP97297 184 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ube2d2bQ6ZWY6 147 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Mrpl53Q9D1H8 118 aaKnown RBP7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ccpg1osV9GXK1 122 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Malrd1A2AJX4 2123 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ly75Q60767 1723 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ca5aP23589 299 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Hist2h2beQ64524 126 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Rchy1Q9CR50 261 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Trav6d-7A0A075B6B0 112 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm10604Q3V0X7 143 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Mrpl55Q9CZ83 127 aa7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Myo5aQ99104 1853 aaKnown RBP7.49□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Igkv13-85A0A075B666 115 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Igkv14-111A0A140T8P9 117 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Colca2F8VPY8 239 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 P01741 114 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 P04219 140 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Chac1Q8R3J5 223 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 GlrxQ9QUH0 107 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Trav4n-4A0A075B615 110 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm29423A0A087WRM1 55 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm12845A0A0N4SUM5 588 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Inafm2A0A1L1STD6 152 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ccl12Q62401 104 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Mapk1ip1Q9D7G9 263 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Tln2Q71LX4 2375 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Foxf2O54743 446 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Hist1h4aP62806 103 aaKnown RBP7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Repin1Q5U4E2 545 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Rnf114Q9ET26 229 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Bdp1Q571C7 2467 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Zfp407G3UVV3 2246 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ighv1-81A0A075B5Y4 117 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm45213A0A0U1RNZ6 101 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Otx1P80205 355 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Trav7d-3Q5R1I1 112 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 TdhQ8K3F7 373 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Lmo1Q924W9 156 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Rpp25lQ99JH1 163 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Prss22Q9ER10 306 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Sipa1l3G3X9J0 1776 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 LeprotO89013 131 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Olfr211Q8VGH2 309 aa7.48□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Trbv13-3A0A0B4J1H2 113 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Pfn1P62962 140 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 KncnQ307W7 124 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Cela3bQ9CQ52 269 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gkn1Q9CR36 201 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ubl5Q9EPV8 73 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ighv1-31A0A0A6YWK5 117 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 H2al1jA2BFR3 109 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Wdr86D3Z757 380 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Tnfrsf26P83626 204 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Lrcol1Q3URS3 161 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 SprnQ8BWU1 147 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ss18l2Q9D174 77 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Defa27F2Z403 93 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 PkigO70139 76 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Hoxd3P09027 433 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Zfp248Q640N4 576 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Rspo4Q8BJ73 228 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Tctex1d4Q8CDY7 219 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Lage3Q9CR70 148 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Lsm4Q9QXA5 137 aaKnown RBP7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm27027S4R1M6 97 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Med12lQ8BQM9 2157 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gtf3c1Q8K284 2101 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Fam208bQ5DTT3 2382 aa7.47□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Scn2aA0A0J9YTW6 2006 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Igkv9-123A0A140T8N8 117 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm5819E9PZ96 154 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Smr2O09133 150 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Defb30Q30KN4 75 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm10767Q3TQP0 103 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Slc25a47Q6IS41 310 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Dpm3Q9D1Q4 92 aa7.46□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 FAM186AQ9D9R9 1790 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Trav8-1A0A075B641 109 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm6871L7N248 545 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 P01724 129 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Trpm7Q923J1 1863 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Igkv6-23A0A140T8N5 115 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 P01660 111 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Q8R092 253 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 3110018I06RikQ9CXS0 120 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Ighv8-2A0A0A6YW58 119 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 P01727 129 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Asphd1Q2TA57 360 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Wipf2Q6PEV3 440 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Taf1Q80UV9 1891 aa7.46□□□□□ -1.22
Ccdc47-201ENSMUST00000002043 Gm9747Q810H1 104 aa7.46□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms