RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 MYO3AQ8NEV4 1616 aa0.42□□□□□ -2.34
TRAPPC8-203ENST00000577474 FAT4Q6V0I7 4981 aa0.41□□□□□ -2.34
TRAPPC8-203ENST00000577474 A0A1B0GUT8 65 aa0.41□□□□□ -2.34
TRAPPC8-203ENST00000577474 CPSF4LA6NMK7 179 aaKnown RBP0.41□□□□□ -2.34
TRAPPC8-203ENST00000577474 WNK2Q9Y3S1 2297 aa0.41□□□□□ -2.34
TRAPPC8-203ENST00000577474 MON2Q7Z3U7 1717 aa0.41□□□□□ -2.34
TRAPPC8-203ENST00000577474 C5P01031 1676 aa0.4□□□□□ -2.34
TRAPPC8-203ENST00000577474 LRP1Q07954 4544 aaKnown RBP0.4□□□□□ -2.34
TRAPPC8-203ENST00000577474 SPTY2D1-AS1A0A0U1RR47 76 aa0.4□□□□□ -2.35
TRAPPC8-203ENST00000577474 MYMXA0A1B0GTQ4 84 aa0.4□□□□□ -2.35
TRAPPC8-203ENST00000577474 DEFB112Q30KQ8 113 aa0.4□□□□□ -2.35
TRAPPC8-203ENST00000577474 MYH4Q9Y623 1939 aa0.4□□□□□ -2.35
TRAPPC8-203ENST00000577474 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
TRAPPC8-203ENST00000577474 SLIT1O75093 1534 aa0.39□□□□□ -2.35
TRAPPC8-203ENST00000577474 KIAA1551Q9HCM1 1747 aa0.39□□□□□ -2.35
TRAPPC8-203ENST00000577474 CCL22O00626 93 aa0.39□□□□□ -2.35
TRAPPC8-203ENST00000577474 DEFB105AQ8NG35 78 aa0.39□□□□□ -2.35
TRAPPC8-203ENST00000577474 NKTRP30414 1462 aaKnown RBP0.39□□□□□ -2.35
TRAPPC8-203ENST00000577474 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
TRAPPC8-203ENST00000577474 KANTRA0A1W2PQU2 76 aa0.38□□□□□ -2.35
TRAPPC8-203ENST00000577474 IQCF6A8MYZ5 107 aa0.38□□□□□ -2.35
TRAPPC8-203ENST00000577474 FXYD6Q9H0Q3 95 aa0.38□□□□□ -2.35
TRAPPC8-203ENST00000577474 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
TRAPPC8-203ENST00000577474 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
TRAPPC8-203ENST00000577474 ATP7BP35670 1465 aa0.37□□□□□ -2.35
TRAPPC8-203ENST00000577474 LRRC9Q6ZRR7 1453 aa0.37□□□□□ -2.35
TRAPPC8-203ENST00000577474 CRYBG1Q9Y4K1 1723 aa0.37□□□□□ -2.35
TRAPPC8-203ENST00000577474 CLIP1P30622 1438 aa0.37□□□□□ -2.35
TRAPPC8-203ENST00000577474 CHD6Q8TD26 2715 aa0.36□□□□□ -2.35
TRAPPC8-203ENST00000577474 RGPD4Q7Z3J3 1758 aa0.35□□□□□ -2.35
TRAPPC8-203ENST00000577474 RPL38P63173 70 aaKnown RBP0.35□□□□□ -2.35
TRAPPC8-203ENST00000577474 BPTFQ12830 3046 aa0.35□□□□□ -2.35
TRAPPC8-203ENST00000577474 TSC2P49815 1807 aa0.35□□□□□ -2.35
TRAPPC8-203ENST00000577474 ANKRD36A6QL64 1941 aa0.34□□□□□ -2.35
TRAPPC8-203ENST00000577474 CEBPZOSA8MTT3 80 aa0.34□□□□□ -2.36
TRAPPC8-203ENST00000577474 MRPL34Q9BQ48 92 aaKnown RBP0.34□□□□□ -2.36
TRAPPC8-203ENST00000577474 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
TRAPPC8-203ENST00000577474 CHD8Q9HCK8 2581 aa0.33□□□□□ -2.36
TRAPPC8-203ENST00000577474 MAST4O15021 2626 aa0.33□□□□□ -2.36
TRAPPC8-203ENST00000577474 S100A13Q99584 98 aa0.33□□□□□ -2.36
TRAPPC8-203ENST00000577474 TENM4Q6N022 2769 aa0.33□□□□□ -2.36
TRAPPC8-203ENST00000577474 ALKQ9UM73 1620 aa0.32□□□□□ -2.36
TRAPPC8-203ENST00000577474 COX7BP24311 80 aa0.32□□□□□ -2.36
TRAPPC8-203ENST00000577474 MAGI2Q86UL8 1455 aa0.32□□□□□ -2.36
TRAPPC8-203ENST00000577474 COL6A3P12111 3177 aa0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 MED14O60244 1454 aa0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 NDUFB1O75438 58 aa0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 TDRG1Q3Y452 100 aa0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 GAFA1Q96PS6 74 aa0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 RGPD3A6NKT7 1758 aaPredicted RBP0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
TRAPPC8-203ENST00000577474 CCDC18Q5T9S5 1454 aa0.3□□□□□ -2.36
TRAPPC8-203ENST00000577474 VWFP04275 2813 aa0.3□□□□□ -2.36
TRAPPC8-203ENST00000577474 MAP3K4Q9Y6R4 1608 aa0.3□□□□□ -2.36
TRAPPC8-203ENST00000577474 KIF20BQ96Q89 1820 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 KIF14Q15058 1648 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 ADIRFQ15847 76 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 FMN2Q9NZ56 1722 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 PPLO60437 1756 aa0.29□□□□□ -2.36
TRAPPC8-203ENST00000577474 PKD1L3Q7Z443 1732 aa0.28□□□□□ -2.36
TRAPPC8-203ENST00000577474 KLK9Q2XQG4 91 aa0.28□□□□□ -2.36
TRAPPC8-203ENST00000577474 ST20Q9HBF5 79 aa0.28□□□□□ -2.36
TRAPPC8-203ENST00000577474 UBR4Q5T4S7 5183 aa0.28□□□□□ -2.37
TRAPPC8-203ENST00000577474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.27□□□□□ -2.37
TRAPPC8-203ENST00000577474 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
TRAPPC8-203ENST00000577474 COX6B2Q6YFQ2 88 aa0.27□□□□□ -2.37
TRAPPC8-203ENST00000577474 CDKN2A-AS1Q9UH64 79 aa0.27□□□□□ -2.37
TRAPPC8-203ENST00000577474 ATRQ13535 2644 aa0.27□□□□□ -2.37
TRAPPC8-203ENST00000577474 PCLOQ9Y6V0 5065 aa0.26□□□□□ -2.37
TRAPPC8-203ENST00000577474 H1FX-AS1Q4G0G2 97 aa0.26□□□□□ -2.37
TRAPPC8-203ENST00000577474 LRRC7Q96NW7 1537 aa0.26□□□□□ -2.37
TRAPPC8-203ENST00000577474 UBR1Q8IWV7 1749 aa0.26□□□□□ -2.37
TRAPPC8-203ENST00000577474 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
TRAPPC8-203ENST00000577474 TRANK1O15050 2925 aa0.25□□□□□ -2.37
TRAPPC8-203ENST00000577474 UBR3Q6ZT12 1888 aa0.25□□□□□ -2.37
TRAPPC8-203ENST00000577474 TRAV21A0A0B4J279 112 aa0.25□□□□□ -2.37
TRAPPC8-203ENST00000577474 URB2Q14146 1524 aaKnown RBP0.24□□□□□ -2.37
TRAPPC8-203ENST00000577474 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
TRAPPC8-203ENST00000577474 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
TRAPPC8-203ENST00000577474 PKD1L2Q7Z442 2459 aa0.23□□□□□ -2.37
TRAPPC8-203ENST00000577474 WFDC9Q8NEX5 89 aa0.23□□□□□ -2.37
TRAPPC8-203ENST00000577474 CELSR1Q9NYQ6 3014 aa0.23□□□□□ -2.37
TRAPPC8-203ENST00000577474 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
TRAPPC8-203ENST00000577474 COL14A1Q05707 1796 aaKnown RBP0.22□□□□□ -2.37
TRAPPC8-203ENST00000577474 SPRR2DP22532 72 aa0.22□□□□□ -2.37
TRAPPC8-203ENST00000577474 ATP5EP2Q5VTU8 51 aa0.22□□□□□ -2.37
TRAPPC8-203ENST00000577474 MUC2Q02817 5179 aa0.22□□□□□ -2.37
TRAPPC8-203ENST00000577474 APC2O95996 2303 aa0.21□□□□□ -2.38
TRAPPC8-203ENST00000577474 PRM1P04553 51 aa0.21□□□□□ -2.38
TRAPPC8-203ENST00000577474 CNOT1A5YKK6 2376 aaKnown RBP0.21□□□□□ -2.38
TRAPPC8-203ENST00000577474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.21□□□□□ -2.38
TRAPPC8-203ENST00000577474 STAB1Q9NY15 2570 aa0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 KIAA1109Q2LD37 5005 aa0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 QSER1Q2KHR3 1735 aa0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 TEP1Q99973 2627 aaKnown RBP0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 A0A0C4DFX4 3053 aa0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 KMT2CQ8NEZ4 4911 aaKnown RBP0.2□□□□□ -2.38
TRAPPC8-203ENST00000577474 COL12A1Q99715 3063 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms