RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
TRAPPC8-203ENST00000577474 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
TRAPPC8-203ENST00000577474 SENP3Q9H4L4 574 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC8-203ENST00000577474 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC8-203ENST00000577474 FOXD1Q16676 465 aa21.99■■□□□ 1.11
TRAPPC8-203ENST00000577474 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
TRAPPC8-203ENST00000577474 MSH5O43196 834 aa20.7■□□□□ 0.9
TRAPPC8-203ENST00000577474 PIAS4Q8N2W9 510 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC8-203ENST00000577474 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
TRAPPC8-203ENST00000577474 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
TRAPPC8-203ENST00000577474 ADRA2BP18089 450 aa20.16■□□□□ 0.82
TRAPPC8-203ENST00000577474 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC8-203ENST00000577474 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
TRAPPC8-203ENST00000577474 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
TRAPPC8-203ENST00000577474 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC8-203ENST00000577474 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
TRAPPC8-203ENST00000577474 PPP4R3CPQ6ZMV5 832 aa17.79■□□□□ 0.44
TRAPPC8-203ENST00000577474 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC8-203ENST00000577474 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
TRAPPC8-203ENST00000577474 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
TRAPPC8-203ENST00000577474 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC8-203ENST00000577474 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
TRAPPC8-203ENST00000577474 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
TRAPPC8-203ENST00000577474 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-203ENST00000577474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAPPC8-203ENST00000577474 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
TRAPPC8-203ENST00000577474 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC8-203ENST00000577474 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC8-203ENST00000577474 DSG3P32926 999 aa16.4■□□□□ 0.22
TRAPPC8-203ENST00000577474 CAPN15O75808 1086 aa16.36■□□□□ 0.21
TRAPPC8-203ENST00000577474 POTEHQ6S545 545 aa16.34■□□□□ 0.21
TRAPPC8-203ENST00000577474 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
TRAPPC8-203ENST00000577474 KCNA4P22459 653 aa16.03■□□□□ 0.16
TRAPPC8-203ENST00000577474 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC8-203ENST00000577474 ABCB7O75027 752 aa15.96■□□□□ 0.15
TRAPPC8-203ENST00000577474 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC8-203ENST00000577474 APLP2Q06481 763 aa15.92■□□□□ 0.14
TRAPPC8-203ENST00000577474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC8-203ENST00000577474 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
TRAPPC8-203ENST00000577474 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC8-203ENST00000577474 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
TRAPPC8-203ENST00000577474 POLA2Q14181 598 aa15.5■□□□□ 0.07
TRAPPC8-203ENST00000577474 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
TRAPPC8-203ENST00000577474 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC8-203ENST00000577474 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC8-203ENST00000577474 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
TRAPPC8-203ENST00000577474 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC8-203ENST00000577474 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
TRAPPC8-203ENST00000577474 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
TRAPPC8-203ENST00000577474 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
TRAPPC8-203ENST00000577474 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
TRAPPC8-203ENST00000577474 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
TRAPPC8-203ENST00000577474 OSCARQ8IYS5 282 aa15□□□□□ -0.01
TRAPPC8-203ENST00000577474 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
TRAPPC8-203ENST00000577474 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAPPC8-203ENST00000577474 HAX1O00165 279 aa14.85□□□□□ -0.03
TRAPPC8-203ENST00000577474 ZBTB22O15209 634 aa14.75□□□□□ -0.05
TRAPPC8-203ENST00000577474 EVX2Q03828 476 aa14.69□□□□□ -0.06
TRAPPC8-203ENST00000577474 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
TRAPPC8-203ENST00000577474 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
TRAPPC8-203ENST00000577474 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
TRAPPC8-203ENST00000577474 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
TRAPPC8-203ENST00000577474 FBLN2P98095 1184 aa14.55□□□□□ -0.08
TRAPPC8-203ENST00000577474 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
TRAPPC8-203ENST00000577474 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
TRAPPC8-203ENST00000577474 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC8-203ENST00000577474 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC8-203ENST00000577474 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
TRAPPC8-203ENST00000577474 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC8-203ENST00000577474 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
TRAPPC8-203ENST00000577474 GABBR2O75899 941 aa14.3□□□□□ -0.12
TRAPPC8-203ENST00000577474 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
TRAPPC8-203ENST00000577474 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
TRAPPC8-203ENST00000577474 LHX8Q68G74 356 aa14.18□□□□□ -0.14
TRAPPC8-203ENST00000577474 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAPPC8-203ENST00000577474 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
TRAPPC8-203ENST00000577474 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
TRAPPC8-203ENST00000577474 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
TRAPPC8-203ENST00000577474 CLCN6P51797 869 aa13.89□□□□□ -0.19
TRAPPC8-203ENST00000577474 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
TRAPPC8-203ENST00000577474 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
TRAPPC8-203ENST00000577474 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
TRAPPC8-203ENST00000577474 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
TRAPPC8-203ENST00000577474 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
TRAPPC8-203ENST00000577474 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC8-203ENST00000577474 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
TRAPPC8-203ENST00000577474 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
TRAPPC8-203ENST00000577474 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
TRAPPC8-203ENST00000577474 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
TRAPPC8-203ENST00000577474 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
TRAPPC8-203ENST00000577474 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
TRAPPC8-203ENST00000577474 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC8-203ENST00000577474 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC8-203ENST00000577474 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
TRAPPC8-203ENST00000577474 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAPPC8-203ENST00000577474 POTEMA6NI47 508 aa13.36□□□□□ -0.27
TRAPPC8-203ENST00000577474 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC8-203ENST00000577474 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
TRAPPC8-203ENST00000577474 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC8-203ENST00000577474 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms