RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 UBE2D1P51668 147 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 RAB5BP61020 215 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 C2orf66Q6UXQ4 117 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 Q8N8P6 123 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 NXT2Q9NPJ8 142 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 TOMM7Q9P0U1 55 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 C6orf48Q9UBA6 75 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 A0A1B0GVG6 124 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 FAM168BA1KXE4 195 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 NDUFC2-KCTD14E9PQ53 114 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 HERVK_113P63121 156 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 ADAMTSL4-AS1Q5T5F5 129 aa2.85□□□□□ -1.95
HERPUD1-213ENST00000568358 IGLV1-50A0A075B6I6 118 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 A0A1B0GV72 72 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 LINC01549A6NIU2 74 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 S100PP25815 95 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 C2orf82Q6UX34 121 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 SMIM29Q86T20 159 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 Q8IZM0 81 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 FAM104AQ969W3 186 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 AMELXQ99217 191 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 KRTAP9-8Q9BYQ0 159 aa2.84□□□□□ -1.95
HERPUD1-213ENST00000568358 IGIPA6NJ69 53 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 RPL37AP8A6NKH3 93 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 F8VRH5 84 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 NUPR1O60356 82 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 CXCL5P42830 114 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 TOMM6Q96B49 74 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 TIMM17AQ99595 171 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 SMCO4Q9NRQ5 59 aa2.83□□□□□ -1.96
HERPUD1-213ENST00000568358 TRAV9-1A0A075B6T8 112 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 A0A087X002 238 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 A0A0U1RQV1 116 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 H3BRM9 83 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 PSPHP1O15172 72 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 ZNF861PO60384 105 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 IFITM2Q01629 132 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 C9orf129Q5T035 196 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 ZC2HC1BQ5TFG8 222 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 FAM19A3Q7Z5A8 133 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 XAGE1AQ9HD64 81 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 C22orf24Q9Y442 160 aa2.82□□□□□ -1.96
HERPUD1-213ENST00000568358 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 SCGB1A1P11684 91 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 NDUFA6P56556 154 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 C1orf195Q5TG92 126 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC00173Q6ZV60 143 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 FA2HQ7L5A8 372 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC00337Q8N6G1 96 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 GNB1LQ9BYB4 327 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 TP73-AS1Q9UF72 201 aa2.81□□□□□ -1.96
HERPUD1-213ENST00000568358 TMEM218A2RU14 115 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 UBE2AP49459 152 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 FABP9Q0Z7S8 132 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 PMVKQ15126 192 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 CLLU1Q5K131 121 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 COMMD7Q86VX2 200 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 CST9LQ9H4G1 147 aa2.8□□□□□ -1.96
HERPUD1-213ENST00000568358 TNXBP22105 4242 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 BCE1O60756 84 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 SPINK8P0C7L1 97 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 CRYGAP11844 174 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC01547P58512 204 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 KRTAP7-1Q8IUC3 87 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC00167Q96N53 147 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC01546A6NGU7 62 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 NDUFS5O43920 106 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 LINC00614P0C842 121 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 COX17Q14061 63 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 SFTA2Q6UW10 78 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 SIGMAR1Q99720 223 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 RPS10P5Q9NQ39 176 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
HERPUD1-213ENST00000568358 IGKV2D-26A0A0A0MRZ7 120 aa2.77□□□□□ -1.97
HERPUD1-213ENST00000568358 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
HERPUD1-213ENST00000568358 RHEBQ15382 184 aa2.77□□□□□ -1.97
HERPUD1-213ENST00000568358 TMEM170BQ5T4T1 132 aa2.77□□□□□ -1.97
HERPUD1-213ENST00000568358 IGLV8-61A0A075B6I0 122 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 IGKV2-28A0A075B6P5 120 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 IGKV2D-28P01615 120 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 HBDP02042 147 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 IGLC3P0DOY3 106 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 DDTP30046 118 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms