RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DAND5Q8N907 189 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 C15orf53Q8NAA6 179 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 UBE2D4Q9Y2X8 147 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
LINC00561-201ENST00000565815 TRBV10-1A0A0K0K1A3 114 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 RS1O15537 224 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 EMP1P54849 157 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 PRR34Q9NV39 138 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 TRAV4A0A0B4J268 109 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 IGHV3-11P01762 117 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 CHCHD7Q9BUK0 85 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 TRAV25A0A0B4J276 109 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 IGLV1-51P01701 117 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
LINC00561-201ENST00000565815 SDIM1Q6ZPB5 146 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 NBEAL2Q6ZNJ1 2754 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 RYR2Q92736 4967 aa2.8□□□□□ -1.96
LINC00561-201ENST00000565815 TEX49A0A1B0GTD5 131 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 INSP01308 110 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 REG3AQ06141 175 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
LINC00561-201ENST00000565815 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
LINC00561-201ENST00000565815 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
LINC00561-201ENST00000565815 H7C2G1 150 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 SPINK13Q1W4C9 94 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 LINC00527Q9UJ94 153 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 DNAH3Q8TD57 4116 aa2.79□□□□□ -1.96
LINC00561-201ENST00000565815 H0YGX0 51 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 CHCHD10Q8WYQ3 142 aaPredicted RBP2.78□□□□□ -1.96
LINC00561-201ENST00000565815 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 A0A1B0GX51 115 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 UQCRQO14949 82 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 RPL28P46779 137 aaKnown RBP2.78□□□□□ -1.96
LINC00561-201ENST00000565815 DEFB1P60022 68 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 PRR4Q16378 134 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 TENM3Q9P273 2699 aa2.78□□□□□ -1.96
LINC00561-201ENST00000565815 MUC4Q99102 2169 aa2.78□□□□□ -1.97
LINC00561-201ENST00000565815 TRAV12-2A0A075B6T6 113 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 C10orf99Q6UWK7 81 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 C11orf72Q8NBR9 251 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 SS18L2Q9UHA2 77 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 IGHV3-64A0A075B6Q5 118 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 ATOX1O00244 68 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 APOC4P55056 127 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 MEIG1Q5JSS6 88 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 S100A7L2Q5SY68 101 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 C5orf38Q86SI9 138 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 ZNF625Q96I27 306 aaPredicted RBP2.77□□□□□ -1.97
LINC00561-201ENST00000565815 HERC2O95714 4834 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 PANO1I0J062 215 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 CRPP02741 224 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 SYNJ2BPP57105 145 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 C3orf22Q8N5N4 141 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 LINC00526Q96FQ7 95 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 CDKN2A-AS1Q9UH64 79 aa2.77□□□□□ -1.97
LINC00561-201ENST00000565815 ALMS1Q8TCU4 4167 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 H3BQ85 93 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 CCDC179H3BU77 68 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 BAALC-AS2P0C853 105 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 DEFB131AP59861 70 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
LINC00561-201ENST00000565815 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 LINC01587Q99440 93 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 TENM2Q9NT68 2774 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 IBA57-AS1B1ANH7 110 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 DNAL4O96015 105 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 RBMY1A1P0DJD3 496 aaKnown RBP2.76□□□□□ -1.97
LINC00561-201ENST00000565815 Q6JHZ5 121 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 C6orf223Q8N319 242 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 DYNLRB2Q8TF09 96 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 C16orf74Q96GX8 76 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 OBSCN-AS1Q96MR7 158 aa2.76□□□□□ -1.97
LINC00561-201ENST00000565815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.75□□□□□ -1.97
LINC00561-201ENST00000565815 IGKV2-29A2NJV5 120 aaPredicted RBP2.75□□□□□ -1.97
LINC00561-201ENST00000565815 F5H768 121 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 ZNF861PO60384 105 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 BCE1O60756 84 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 CRYGAP11844 174 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 HIST1H4AP62805 103 aaKnown RBP2.75□□□□□ -1.97
LINC00561-201ENST00000565815 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
LINC00561-201ENST00000565815 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 TMEM243Q9BU79 118 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 CDC42SE2Q9NRR3 84 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 FAM236AA0A1B0GUQ0 79 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 FAM236BA0A1B0GV22 79 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 UBE2L6O14933 153 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 COX7CP15954 63 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 SEC61GP60059 68 aa2.75□□□□□ -1.97
LINC00561-201ENST00000565815 TRBV6-4A0A1B0GX49 114 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 DEFB114Q30KQ6 69 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms