RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 K7EP34 96 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 K7ERU9 68 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 TIMM17BO60830 172 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 IFITM1P13164 125 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 HERV-K104P63124 156 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 SLC25A29Q8N8R3 303 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 SPCS1Q9Y6A9 102 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
CASC4-207ENST00000559037 TRBV20-1A0A075B6N2 111 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 IGHV3-30-3P0DP02 117 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 UBE2D1P51668 147 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 FXYD2P54710 66 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 Q6ZUT4 128 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 C6orf223Q8N319 242 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 RAB37Q96AX2 223 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 PRO0255Q9UI72 69 aa3.34□□□□□ -1.87
CASC4-207ENST00000559037 HERC2O95714 4834 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 TRBV6-8A0A0A6YYG3 113 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 A0A0B4J2C4 111 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 K7EP13 123 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 NDUFA1O15239 70 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 COX6CP09669 75 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 MRPL23Q16540 153 aaKnown RBP3.33□□□□□ -1.88
CASC4-207ENST00000559037 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 SPANXDQ9BXN6 97 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 SPANXCQ9NY87 97 aa3.33□□□□□ -1.88
CASC4-207ENST00000559037 F8W1H4 67 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 SS18Q15532 418 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 MIAQ16674 131 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 TTC32Q5I0X7 151 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 Q6ZRN7 208 aaPredicted RBP3.32□□□□□ -1.88
CASC4-207ENST00000559037 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 MTURNQ8N3F0 131 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 C2orf48Q96LS8 159 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 CDC42SE2Q9NRR3 84 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 PRO1854Q9UHT4 67 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 ICOSQ9Y6W8 199 aa3.32□□□□□ -1.88
CASC4-207ENST00000559037 HSPG2P98160 4391 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 TRAV13-1A0A0B4J241 112 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 K7ERJ3 54 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 APOMO95445 188 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 SPINK8P0C7L1 97 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 SCGB1C2P0DMR2 95 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 LINC00694P0DN24 101 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 CXCL5P42830 114 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 Q1RN00 199 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 MEIG1Q5JSS6 88 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 C10orf126Q8N4M7 172 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 ERG28Q9UKR5 140 aa3.31□□□□□ -1.88
CASC4-207ENST00000559037 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
CASC4-207ENST00000559037 IGHV3-64A0A075B6Q5 118 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 PSMB2P49721 201 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 TSPEAR-AS2P59090 65 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 ATXN8Q156A1 80 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 RNASE13Q5GAN3 156 aaKnown RBP3.3□□□□□ -1.88
CASC4-207ENST00000559037 LINC00242Q5T6M2 205 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 FAM218AQ96MZ4 157 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
CASC4-207ENST00000559037 TRAV8-3A0A0A6YYJ7 113 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 A4D1N5 150 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 TMEM262E9PQX1 116 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 M0QXV9 152 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 TSPAN13O95857 204 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 DNAH10OSP0CZ25 163 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 OCIAD2Q56VL3 154 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
CASC4-207ENST00000559037 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 A0A087WZ39 114 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 TRAV13-2A0A0B4J235 113 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 IBA57-AS1B1ANH7 110 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 LELP1Q5T871 98 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 WFDC10BQ8IUB3 73 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 MUSTN1Q8IVN3 82 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 FAM104AQ969W3 186 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 VPS25Q9BRG1 176 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 Q9UF83 564 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 RYR1P21817 5038 aa3.28□□□□□ -1.88
CASC4-207ENST00000559037 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
CASC4-207ENST00000559037 A0A087WTM6 91 aa3.27□□□□□ -1.89
CASC4-207ENST00000559037 LINC00959A0A1B0GUT2 108 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms