RNA–Protein interactions for RNA: ENST00000556221.1

PSMA6-213, Transcript of proteasome subunit alpha 6, humanhuman

TSL 3

Gene PSMA6, Length 423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-213ENST00000556221 IQSEC2Q5JU85 1478 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 CSMD3Q7Z407 3707 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 TRAV21A0A0B4J279 112 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 MAST4O15021 2626 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 H1FX-AS1Q4G0G2 97 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 HEPN1Q6WQI6 88 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 XRN1Q8IZH2 1706 aaKnown RBP0.17□□□□□ -2.38
PSMA6-213ENST00000556221 MRPL34Q9BQ48 92 aaKnown RBP0.17□□□□□ -2.38
PSMA6-213ENST00000556221 ST20Q9HBF5 79 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 PPRC1Q5VV67 1664 aaKnown RBP0.17□□□□□ -2.38
PSMA6-213ENST00000556221 CUX1P39880 1505 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
PSMA6-213ENST00000556221 CCDC141Q6ZP82 1450 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 A0A0G2JMZ2 1700 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 NUP188Q5SRE5 1749 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 ANKRD26Q9UPS8 1709 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 SAMD9Q5K651 1589 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 CEP162Q5TB80 1403 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 ATRQ13535 2644 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 COX7BP24311 80 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 WFDC9Q8NEX5 89 aa0.16□□□□□ -2.38
PSMA6-213ENST00000556221 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
PSMA6-213ENST00000556221 MYH4Q9Y623 1939 aa0.15□□□□□ -2.39
PSMA6-213ENST00000556221 CLTCQ00610 1675 aaKnown RBP0.15□□□□□ -2.39
PSMA6-213ENST00000556221 UACAQ9BZF9 1416 aa0.15□□□□□ -2.39
PSMA6-213ENST00000556221 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
PSMA6-213ENST00000556221 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
PSMA6-213ENST00000556221 ABCA2Q9BZC7 2435 aa0.15□□□□□ -2.39
PSMA6-213ENST00000556221 CLIP1P30622 1438 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 NCOR1O75376 2440 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 TARBP1Q13395 1621 aaKnown RBP0.14□□□□□ -2.39
PSMA6-213ENST00000556221 MON2Q7Z3U7 1717 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 WNK2Q9Y3S1 2297 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 H3BUT2 72 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 PRM1P04553 51 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 LELP1Q5T871 98 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 CDKN2A-AS1Q9UH64 79 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 NKTRP30414 1462 aaKnown RBP0.14□□□□□ -2.39
PSMA6-213ENST00000556221 PAPPA2Q9BXP8 1791 aa0.14□□□□□ -2.39
PSMA6-213ENST00000556221 FMN2Q9NZ56 1722 aa0.13□□□□□ -2.39
PSMA6-213ENST00000556221 CSPG4Q6UVK1 2322 aa0.13□□□□□ -2.39
PSMA6-213ENST00000556221 CCL22O00626 93 aa0.13□□□□□ -2.39
PSMA6-213ENST00000556221 RPL38P63173 70 aaKnown RBP0.13□□□□□ -2.39
PSMA6-213ENST00000556221 PTPN13Q12923 2485 aa0.13□□□□□ -2.39
PSMA6-213ENST00000556221 SHPRHQ149N8 1683 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 MAGI2Q86UL8 1455 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 A0A087WXM4 84 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 NDUFB1O75438 58 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 IFI6P09912 130 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 ANKRD36A6QL64 1941 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 KIAA1551Q9HCM1 1747 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 KIAA0556O60303 1618 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 ABCC3O15438 1527 aa0.12□□□□□ -2.39
PSMA6-213ENST00000556221 LRP1Q07954 4544 aaKnown RBP0.12□□□□□ -2.39
PSMA6-213ENST00000556221 ATP7BP35670 1465 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 TSC2P49815 1807 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 UMAD1C9J7I0 102 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 NDUFA3O95167 84 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 BVES-AS1Q5T3Y7 98 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 WFDC13Q8IUB5 93 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 CHD8Q9HCK8 2581 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 C5P01031 1676 aa0.11□□□□□ -2.39
PSMA6-213ENST00000556221 MED14O60244 1454 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 CRYBG1Q9Y4K1 1723 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 UBR3Q6ZT12 1888 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 RGPD4Q7Z3J3 1758 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 IFI27P40305 119 aaPredicted RBP0.1□□□□□ -2.39
PSMA6-213ENST00000556221 DEFB121Q5J5C9 76 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 SPTA1P02549 2419 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 CCDC18Q5T9S5 1454 aa0.1□□□□□ -2.39
PSMA6-213ENST00000556221 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.09□□□□□ -2.397e-12■■■■■ 46.9
PSMA6-213ENST00000556221 LRRC7Q96NW7 1537 aa0.09□□□□□ -2.39
PSMA6-213ENST00000556221 DCHS2Q6V1P9 2916 aa0.09□□□□□ -2.39
PSMA6-213ENST00000556221 SETXQ7Z333 2677 aaKnown RBP0.09□□□□□ -2.39
PSMA6-213ENST00000556221 SMIM13P0DJ93 91 aa0.09□□□□□ -2.4
PSMA6-213ENST00000556221 C18orf32Q8TCD1 76 aa0.09□□□□□ -2.4
PSMA6-213ENST00000556221 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
PSMA6-213ENST00000556221 LRRC37AA6NMS7 1700 aa0.09□□□□□ -2.4
PSMA6-213ENST00000556221 RGPD3A6NKT7 1758 aaPredicted RBP0.09□□□□□ -2.4
PSMA6-213ENST00000556221 NSD1Q96L73 2696 aaPredicted RBP0.09□□□□□ -2.4
PSMA6-213ENST00000556221 REV3LO60673 3130 aa0.09□□□□□ -2.4
PSMA6-213ENST00000556221 M0R2T5 61 aa0.08□□□□□ -2.4
PSMA6-213ENST00000556221 MYO3AQ8NEV4 1616 aa0.08□□□□□ -2.4
PSMA6-213ENST00000556221 NCOA2Q15596 1464 aa0.08□□□□□ -2.4
PSMA6-213ENST00000556221 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
PSMA6-213ENST00000556221 RGPD2P0DJD1 1756 aa0.07□□□□□ -2.4
PSMA6-213ENST00000556221 SPRR2DP22532 72 aa0.07□□□□□ -2.4
PSMA6-213ENST00000556221 COX6B2Q6YFQ2 88 aa0.07□□□□□ -2.4
PSMA6-213ENST00000556221 KIF20BQ96Q89 1820 aa0.07□□□□□ -2.4
PSMA6-213ENST00000556221 FLNCQ14315 2725 aa0.07□□□□□ -2.4
PSMA6-213ENST00000556221 KIF14Q15058 1648 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 ERVK-7P63135 1459 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 NREPQ16612 68 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 ATP5EP2Q5VTU8 51 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 UBR1Q8IWV7 1749 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 WNK1Q9H4A3 2382 aa0.06□□□□□ -2.4
PSMA6-213ENST00000556221 RB1CC1Q8TDY2 1594 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms