RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 V9GYV3 84 aa2.32□□□□□ -2.04
LETMD1-226ENST00000550755 CNTRLQ7Z7A1 2325 aa2.31□□□□□ -2.04
LETMD1-226ENST00000550755 F2Z2F3 143 aa2.31□□□□□ -2.04
LETMD1-226ENST00000550755 RPS27P42677 84 aaKnown RBP2.31□□□□□ -2.04
LETMD1-226ENST00000550755 GDF5OSQ5U4N7 250 aa2.31□□□□□ -2.04
LETMD1-226ENST00000550755 DEFB119Q8N690 84 aa2.31□□□□□ -2.04
LETMD1-226ENST00000550755 VCANP13611 3396 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 TRIOO75962 3097 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 EYSQ5T1H1 3165 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 H3BUT2 72 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 CCL18P55774 89 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 PSMG4Q5JS54 123 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 PROK2Q9HC23 129 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 ARL2-SNX15V9GYD0 113 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 MYO15AQ9UKN7 3530 aa2.3□□□□□ -2.04
LETMD1-226ENST00000550755 CACNA1HO95180 2353 aa2.29□□□□□ -2.04
LETMD1-226ENST00000550755 DNAJC13O75165 2243 aa2.29□□□□□ -2.04
LETMD1-226ENST00000550755 SAA2P0DJI9 122 aaPredicted RBP2.29□□□□□ -2.04
LETMD1-226ENST00000550755 EFNA4P52798 201 aa2.29□□□□□ -2.04
LETMD1-226ENST00000550755 LINC00208Q96KT6 92 aa2.29□□□□□ -2.04
LETMD1-226ENST00000550755 TMEM14BQ9NUH8 114 aa2.29□□□□□ -2.04
LETMD1-226ENST00000550755 TNRC18O15417 2968 aaPredicted RBP2.29□□□□□ -2.04
LETMD1-226ENST00000550755 FBN1P35555 2871 aaKnown RBP2.29□□□□□ -2.04
LETMD1-226ENST00000550755 FAM186AA6NE01 2351 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 KNTC1P50748 2209 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 PRUNE2Q8WUY3 3088 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 A0A087WTM6 91 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 CFDP00746 253 aaPredicted RBP2.28□□□□□ -2.04
LETMD1-226ENST00000550755 ACYP1P07311 99 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 CFAP126Q5VTH2 177 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 AMELXQ99217 191 aa2.28□□□□□ -2.04
LETMD1-226ENST00000550755 A0A0C4DFX4 3053 aa2.28□□□□□ -2.05
LETMD1-226ENST00000550755 OTOGLQ3ZCN5 2332 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
LETMD1-226ENST00000550755 F8VRH5 84 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 F8WEM9 126 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 H3BSH0 61 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 M0R135 149 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 LINC00643Q86TS7 51 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
LETMD1-226ENST00000550755 LINC01600Q96MT4 127 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 NMES1Q9C002 83 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 MED13LQ71F56 2210 aa2.27□□□□□ -2.05
LETMD1-226ENST00000550755 LAMA1P25391 3075 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 FXYD6-FXYD2A0A087WZ82 144 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 ARHGAP5-AS1Q96IT6 56 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 OBSCN-AS1Q96MR7 158 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 FXYD6Q9H0Q3 95 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 BDP1A6H8Y1 2624 aa2.26□□□□□ -2.05
LETMD1-226ENST00000550755 SPEGQ15772 3267 aa2.25□□□□□ -2.05
LETMD1-226ENST00000550755 CTXND1A0A1B0GTU2 59 aa2.25□□□□□ -2.05
LETMD1-226ENST00000550755 Q6ZQY7 126 aa2.25□□□□□ -2.05
LETMD1-226ENST00000550755 BAGE3Q86Y29 109 aa2.25□□□□□ -2.05
LETMD1-226ENST00000550755 USF3Q68DE3 2245 aa2.25□□□□□ -2.05
LETMD1-226ENST00000550755 WDR87Q6ZQQ6 2873 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 WDFY3Q8IZQ1 3526 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 DMDP11532 3685 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 BAGE2Q86Y30 109 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 C18orf32Q8TCD1 76 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 MUC3AQ02505 3323 aa2.24□□□□□ -2.05
LETMD1-226ENST00000550755 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
LETMD1-226ENST00000550755 PLCE1Q9P212 2302 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 UQCR11O14957 56 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 MRPL33O75394 65 aaKnown RBP2.23□□□□□ -2.05
LETMD1-226ENST00000550755 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 PIGYQ3MUY2 71 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 UNQ6190/PRO20217Q6UXQ8 127 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 CCL19Q99731 98 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 PSENENQ9NZ42 101 aa2.23□□□□□ -2.05
LETMD1-226ENST00000550755 C7orf77A4D0Y5 90 aa2.22□□□□□ -2.05
LETMD1-226ENST00000550755 HMGN3Q15651 99 aa2.22□□□□□ -2.05
LETMD1-226ENST00000550755 URB1O60287 2271 aaKnown RBP2.22□□□□□ -2.05
LETMD1-226ENST00000550755 EP300Q09472 2414 aaPredicted RBP2.22□□□□□ -2.05
LETMD1-226ENST00000550755 IQCF6A8MYZ5 107 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 M0R3E3 92 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 ARMS2P0C7Q2 107 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 Q96NJ1 140 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 VPS13AQ96RL7 3174 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 GVINP1Q7Z2Y8 2422 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 CEP250Q9BV73 2442 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 CADP27708 2225 aa2.21□□□□□ -2.06
LETMD1-226ENST00000550755 COL6A3P12111 3177 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 MUC6Q6W4X9 2439 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 TRGV1A0A0A0MS02 117 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 MYMXA0A1B0GTQ4 84 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 UMAD1C9J7I0 102 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 LEPROTL1O95214 131 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 HEPN1Q6WQI6 88 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 ABCA1O95477 2261 aa2.2□□□□□ -2.06
LETMD1-226ENST00000550755 RIF1Q5UIP0 2472 aaKnown RBP2.19□□□□□ -2.06
LETMD1-226ENST00000550755 ACACAQ13085 2346 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms