RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
LETMD1-226ENST00000550755 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
LETMD1-226ENST00000550755 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
LETMD1-226ENST00000550755 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
LETMD1-226ENST00000550755 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
LETMD1-226ENST00000550755 FOXD1Q16676 465 aa23.46■■□□□ 1.35
LETMD1-226ENST00000550755 ADRA2BP18089 450 aa22.49■■□□□ 1.19
LETMD1-226ENST00000550755 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
LETMD1-226ENST00000550755 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
LETMD1-226ENST00000550755 MSH5O43196 834 aa21.78■■□□□ 1.08
LETMD1-226ENST00000550755 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
LETMD1-226ENST00000550755 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
LETMD1-226ENST00000550755 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
LETMD1-226ENST00000550755 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
LETMD1-226ENST00000550755 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
LETMD1-226ENST00000550755 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
LETMD1-226ENST00000550755 KCNA4P22459 653 aa20.09■□□□□ 0.81
LETMD1-226ENST00000550755 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
LETMD1-226ENST00000550755 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
LETMD1-226ENST00000550755 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
LETMD1-226ENST00000550755 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
LETMD1-226ENST00000550755 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
LETMD1-226ENST00000550755 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LETMD1-226ENST00000550755 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
LETMD1-226ENST00000550755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
LETMD1-226ENST00000550755 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
LETMD1-226ENST00000550755 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
LETMD1-226ENST00000550755 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
LETMD1-226ENST00000550755 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
LETMD1-226ENST00000550755 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-226ENST00000550755 ZBTB22O15209 634 aa18.42■□□□□ 0.54
LETMD1-226ENST00000550755 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
LETMD1-226ENST00000550755 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-226ENST00000550755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
LETMD1-226ENST00000550755 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LETMD1-226ENST00000550755 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
LETMD1-226ENST00000550755 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-226ENST00000550755 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-226ENST00000550755 APLP2Q06481 763 aa18.22■□□□□ 0.51
LETMD1-226ENST00000550755 CAPN15O75808 1086 aa18.01■□□□□ 0.47
LETMD1-226ENST00000550755 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-226ENST00000550755 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
LETMD1-226ENST00000550755 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
LETMD1-226ENST00000550755 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
LETMD1-226ENST00000550755 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-226ENST00000550755 DSG3P32926 999 aa17.65■□□□□ 0.42
LETMD1-226ENST00000550755 ABCB7O75027 752 aa17.61■□□□□ 0.41
LETMD1-226ENST00000550755 POLA2Q14181 598 aa17.55■□□□□ 0.4
LETMD1-226ENST00000550755 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
LETMD1-226ENST00000550755 FBLN2P98095 1184 aa17.22■□□□□ 0.35
LETMD1-226ENST00000550755 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-226ENST00000550755 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
LETMD1-226ENST00000550755 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
LETMD1-226ENST00000550755 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-226ENST00000550755 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
LETMD1-226ENST00000550755 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
LETMD1-226ENST00000550755 FKBP8Q14318 412 aa16.6■□□□□ 0.25
LETMD1-226ENST00000550755 SSUH2Q9Y2M2 353 aa16.6■□□□□ 0.25
LETMD1-226ENST00000550755 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
LETMD1-226ENST00000550755 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-226ENST00000550755 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-226ENST00000550755 PROM2Q8N271 834 aa16.31■□□□□ 0.2
LETMD1-226ENST00000550755 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
LETMD1-226ENST00000550755 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
LETMD1-226ENST00000550755 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
LETMD1-226ENST00000550755 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
LETMD1-226ENST00000550755 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
LETMD1-226ENST00000550755 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
LETMD1-226ENST00000550755 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
LETMD1-226ENST00000550755 PIP4P2Q8N4L2 257 aa15.95■□□□□ 0.14
LETMD1-226ENST00000550755 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
LETMD1-226ENST00000550755 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
LETMD1-226ENST00000550755 MIER1Q8N108 512 aa15.89■□□□□ 0.13
LETMD1-226ENST00000550755 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
LETMD1-226ENST00000550755 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
LETMD1-226ENST00000550755 VASPP50552 380 aaPredicted RBP15.82■□□□□ 0.12
LETMD1-226ENST00000550755 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
LETMD1-226ENST00000550755 POTEHQ6S545 545 aa15.8■□□□□ 0.12
LETMD1-226ENST00000550755 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
LETMD1-226ENST00000550755 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
LETMD1-226ENST00000550755 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
LETMD1-226ENST00000550755 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
LETMD1-226ENST00000550755 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
LETMD1-226ENST00000550755 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
LETMD1-226ENST00000550755 HAX1O00165 279 aa15.54■□□□□ 0.08
LETMD1-226ENST00000550755 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
LETMD1-226ENST00000550755 SPOCK2Q92563 424 aa15.46■□□□□ 0.07
LETMD1-226ENST00000550755 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
LETMD1-226ENST00000550755 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
LETMD1-226ENST00000550755 NUBP1P53384 320 aa15.39■□□□□ 0.05
LETMD1-226ENST00000550755 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
LETMD1-226ENST00000550755 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-226ENST00000550755 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
LETMD1-226ENST00000550755 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
LETMD1-226ENST00000550755 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
LETMD1-226ENST00000550755 GSE1Q14687 1217 aa15.29■□□□□ 0.04
LETMD1-226ENST00000550755 CIZ1Q9ULV3 898 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms