RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PRKDCP78527 4128 aaKnown RBP-0.14□□□□□ -2.43
SKP1-207ENST00000520417 BPTFQ12830 3046 aa-0.14□□□□□ -2.43
SKP1-207ENST00000520417 PLEKHH2Q8IVE3 1493 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 NLRP1Q9C000 1473 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 D6R8Y8 96 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 H7BZZ5 65 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 M0R2T5 61 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 LEPROTL1O95214 131 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 NCMAPQ5T1S8 102 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 MUSTN1Q8IVN3 82 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 FAM135AQ9P2D6 1515 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 LRP1BQ9NZR2 4599 aa-0.15□□□□□ -2.43
SKP1-207ENST00000520417 TOP2BQ02880 1626 aa-0.16□□□□□ -2.43
SKP1-207ENST00000520417 ANKRD11Q6UB99 2663 aaPredicted RBP-0.16□□□□□ -2.43
SKP1-207ENST00000520417 UQCRHLA0A096LP55 91 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 M0R143 59 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 HEPN1Q6WQI6 88 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 ZNF720Q7Z2F6 126 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.44
SKP1-207ENST00000520417 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 SPHKAPQ2M3C7 1700 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 CCDC141Q6ZP82 1450 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 MLH3Q9UHC1 1453 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 SHROOM2Q13796 1616 aa-0.16□□□□□ -2.44
SKP1-207ENST00000520417 PDZD2O15018 2839 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 PRRC2CQ9Y520 2896 aaKnown RBP-0.17□□□□□ -2.44
SKP1-207ENST00000520417 TRBV7-7A0A0K0K1E9 115 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 HMGN3Q15651 99 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 ETDBQ3ZM63 59 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 H1FX-AS1Q4G0G2 97 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 ALKAL2Q6UX46 152 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 PSENENQ9NZ42 101 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 NCOA3Q9Y6Q9 1424 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 DSPP15924 2871 aaKnown RBP-0.17□□□□□ -2.44
SKP1-207ENST00000520417 MYO18BQ8IUG5 2567 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 USP9XQ93008 2570 aaPredicted RBP-0.17□□□□□ -2.44
SKP1-207ENST00000520417 TGP01266 2768 aa-0.17□□□□□ -2.44
SKP1-207ENST00000520417 NF1P21359 2839 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 ANKRD36BQ8N2N9 1353 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 FMN2Q9NZ56 1722 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 SPTY2D1-AS1A0A0U1RR47 76 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 KRTAP20-2Q3LI61 65 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 CC2D2AQ9P2K1 1620 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 MRC2Q9UBG0 1479 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 SCN7AQ01118 1682 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 USP9YO00507 2555 aaPredicted RBP-0.18□□□□□ -2.44
SKP1-207ENST00000520417 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 LAMA3Q16787 3333 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 A0A0G2JMZ2 1700 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 KNDC1Q76NI1 1749 aa-0.18□□□□□ -2.44
SKP1-207ENST00000520417 DIP2CQ9Y2E4 1556 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 TRANK1O15050 2925 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 REV3LO60673 3130 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 F8WEM9 126 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 IGLC2P0DOY2 106 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 IGLC3P0DOY3 106 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 COL4A6Q14031 1691 aa-0.19□□□□□ -2.44
SKP1-207ENST00000520417 XRN1Q8IZH2 1706 aaKnown RBP-0.19□□□□□ -2.44
SKP1-207ENST00000520417 SPRR2BP35325 72 aa-0.2□□□□□ -2.44
SKP1-207ENST00000520417 MRPL34Q9BQ48 92 aaKnown RBP-0.2□□□□□ -2.44
SKP1-207ENST00000520417 ZFYVE16Q7Z3T8 1539 aa-0.2□□□□□ -2.44
SKP1-207ENST00000520417 KIAA0556O60303 1618 aa-0.2□□□□□ -2.44
SKP1-207ENST00000520417 ANKRD36A6QL64 1941 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 CNTLNQ9NXG0 1405 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 PRDM15P57071 1507 aaPredicted RBP-0.21□□□□□ -2.44
SKP1-207ENST00000520417 CCL22O00626 93 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 MT4P47944 62 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 SMIM11AP58511 58 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 DEFB135Q30KP9 77 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 DEFB112Q30KQ8 113 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 CDKN2A-AS1Q9UH64 79 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 ABCA3Q99758 1704 aa-0.21□□□□□ -2.44
SKP1-207ENST00000520417 RAPGEF2Q9Y4G8 1499 aa-0.22□□□□□ -2.44
SKP1-207ENST00000520417 AKAP13Q12802 2813 aa-0.22□□□□□ -2.44
SKP1-207ENST00000520417 NUP188Q5SRE5 1749 aa-0.22□□□□□ -2.44
SKP1-207ENST00000520417 CLIP1P30622 1438 aa-0.22□□□□□ -2.45
SKP1-207ENST00000520417 NKTRP30414 1462 aaKnown RBP-0.22□□□□□ -2.45
SKP1-207ENST00000520417 IQSEC2Q5JU85 1478 aa-0.22□□□□□ -2.45
SKP1-207ENST00000520417 LAMA2P24043 3122 aaKnown RBP-0.23□□□□□ -2.45
SKP1-207ENST00000520417 S100A8P05109 93 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 C9orf62Q8N4C0 152 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 LYSTQ99698 3801 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 HIGD1BQ9P298 99 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 EDC4Q6P2E9 1401 aaKnown RBP-0.23□□□□□ -2.45
SKP1-207ENST00000520417 TEX14Q8IWB6 1497 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 NRXN1Q9ULB1 1477 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 ABCC2Q92887 1545 aa-0.23□□□□□ -2.45
SKP1-207ENST00000520417 NIPBLQ6KC79 2804 aaeCLIP-0.23□□□□□ -2.45
SKP1-207ENST00000520417 MYO15AQ9UKN7 3530 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 CHD1O14646 1710 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 MARF1Q9Y4F3 1742 aaKnown RBP-0.24□□□□□ -2.45
SKP1-207ENST00000520417 CCDC168Q8NDH2 2452 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 GYPAP02724 150 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 PKIAP61925 76 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 PEA15Q15121 130 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 KRTAP19-6Q3LI70 58 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 WFDC13Q8IUB5 93 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 PCNX1Q96RV3 2341 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 FYCO1Q9BQS8 1478 aa-0.24□□□□□ -2.45
SKP1-207ENST00000520417 TOPAZ1Q8N9V7 1692 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms