RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MT-ATP8P03928 68 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 GNGT1P63211 74 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 PMCHL1Q16048 86 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 FAT3Q8TDW7 4589 aa-0.43□□□□□ -2.48
LTN1-206ENST00000486427 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 NF1P21359 2839 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 NDUFC1O43677 76 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 DEFB135Q30KP9 77 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 LELP1Q5T871 98 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 TRGV9Q99603 122 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 PMCHL2Q9BQD1 86 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 NRXN1Q9ULB1 1477 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 LAMA5O15230 3695 aa-0.44□□□□□ -2.48
LTN1-206ENST00000486427 ANKRD36BQ8N2N9 1353 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 DNAH6Q9C0G6 4158 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 KIF20BQ96Q89 1820 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 HERC2O95714 4834 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 TMEM218A2RU14 115 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 UQCRHP07919 91 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 ARMS2P0C7Q2 107 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 S100A10P60903 97 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 C14orf144Q96I85 54 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 MRPL34Q9BQ48 92 aaKnown RBP-0.45□□□□□ -2.48
LTN1-206ENST00000486427 ADAMTS12P58397 1594 aa-0.45□□□□□ -2.48
LTN1-206ENST00000486427 FAT1Q14517 4588 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 RGPD2P0DJD1 1756 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 ABCC2Q92887 1545 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 S100PP25815 95 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 KRTAP19-8Q3LI54 63 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 PTPN23Q9H3S7 1636 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 AKAP13Q12802 2813 aa-0.46□□□□□ -2.48
LTN1-206ENST00000486427 CRYBG1Q9Y4K1 1723 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 KNL1Q8NG31 2342 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 RAPGEF2Q9Y4G8 1499 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 BCORQ6W2J9 1755 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 USH2AO75445 5202 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 SAMD9Q5K651 1589 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 TRAV30A0A087WSZ9 112 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 ATP6V1G2-DDX39BF2Z307 99 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 MPC2O95563 127 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 DEFB112Q30KQ8 113 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 C9orf62Q8N4C0 152 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 SERP2Q8N6R1 65 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 AP4S1Q9Y587 144 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 MYH4Q9Y623 1939 aa-0.47□□□□□ -2.48
LTN1-206ENST00000486427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.47□□□□□ -2.48
LTN1-206ENST00000486427 MXRA5Q9NR99 2828 aa-0.47□□□□□ -2.49
LTN1-206ENST00000486427 PEG3Q9GZU2 1588 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 NBASA2RRP1 2371 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 PRRC2CQ9Y520 2896 aaKnown RBP-0.48□□□□□ -2.49
LTN1-206ENST00000486427 TRANK1O15050 2925 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 CLTCQ00610 1675 aaKnown RBP-0.48□□□□□ -2.49
LTN1-206ENST00000486427 PREX1Q8TCU6 1659 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 TRBV7-7A0A0K0K1E9 115 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 ATOX1O00244 68 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 HEPN1Q6WQI6 88 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 PSENENQ9NZ42 101 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 SPTBN4Q9H254 2564 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 FYCO1Q9BQS8 1478 aa-0.48□□□□□ -2.49
LTN1-206ENST00000486427 UBR4Q5T4S7 5183 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 ALKQ9UM73 1620 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 QSER1Q2KHR3 1735 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 PKD1L3Q7Z443 1732 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 SPTY2D1-AS1A0A0U1RR47 76 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 IGLC2P0DOY2 106 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 IGLC3P0DOY3 106 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 TCEAL7Q9BRU2 100 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 DNAH9Q9NYC9 4486 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 CNTLNQ9NXG0 1405 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 STARD9Q9P2P6 4700 aa-0.49□□□□□ -2.49
LTN1-206ENST00000486427 F8WEM9 126 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 CCL22O00626 93 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 FAUP35544 74 aaKnown RBP-0.5□□□□□ -2.49
LTN1-206ENST00000486427 ETDBQ3ZM63 59 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 COL5A1-AS1Q5SY13 56 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 WFDC13Q8IUB5 93 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 CDKN2A-AS1Q9UH64 79 aa-0.5□□□□□ -2.49
LTN1-206ENST00000486427 TNRC18O15417 2968 aaPredicted RBP-0.5□□□□□ -2.49
LTN1-206ENST00000486427 D6R8Y8 96 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 LEPROTL1O95214 131 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 CLIP1P30622 1438 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 RBP2P50120 134 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 NCMAPQ5T1S8 102 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 UBR3Q6ZT12 1888 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 MUSTN1Q8IVN3 82 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 TEX14Q8IWB6 1497 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 DPY30Q9C005 99 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 HTTP42858 3142 aa-0.51□□□□□ -2.49
LTN1-206ENST00000486427 ANKRD26Q9UPS8 1709 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 EPRSP07814 1512 aaKnown RBP-0.52□□□□□ -2.49
LTN1-206ENST00000486427 UQCRHLA0A096LP55 91 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 LINC00032P0C843 101 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 HMGN3Q15651 99 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 ZNF720Q7Z2F6 126 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 HIGD1BQ9P298 99 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 VPS13DQ5THJ4 4388 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 RGPD1P0DJD0 1748 aa-0.52□□□□□ -2.49
LTN1-206ENST00000486427 UBR1Q8IWV7 1749 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms