RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 FAT1Q14517 4588 aa-0.31□□□□□ -2.46
RGPD6-209ENST00000480894 D6R8Y8 96 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 F8WEM9 126 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 PKIAP61925 76 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 MUSTN1Q8IVN3 82 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 SNHG12Q9BXW3 62 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 TENM2Q9NT68 2774 aa-0.32□□□□□ -2.46
RGPD6-209ENST00000480894 PKHD1P08F94 4074 aa-0.33□□□□□ -2.46
RGPD6-209ENST00000480894 ANKRD17O75179 2603 aaKnown RBP-0.33□□□□□ -2.46
RGPD6-209ENST00000480894 LEPROTL1O95214 131 aa-0.33□□□□□ -2.46
RGPD6-209ENST00000480894 DCHS2Q6V1P9 2916 aa-0.33□□□□□ -2.46
RGPD6-209ENST00000480894 COL6A3P12111 3177 aa-0.33□□□□□ -2.46
RGPD6-209ENST00000480894 USH2AO75445 5202 aa-0.34□□□□□ -2.46
RGPD6-209ENST00000480894 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
RGPD6-209ENST00000480894 APC2O95996 2303 aa-0.35□□□□□ -2.47
RGPD6-209ENST00000480894 LRRC37AA6NMS7 1700 aa-0.35□□□□□ -2.47
RGPD6-209ENST00000480894 ANKRD36A6QL64 1941 aa-0.36□□□□□ -2.47
RGPD6-209ENST00000480894 M0R2T5 61 aa-0.36□□□□□ -2.47
RGPD6-209ENST00000480894 SPRR2BP35325 72 aa-0.36□□□□□ -2.47
RGPD6-209ENST00000480894 SAMD9Q5K651 1589 aa-0.36□□□□□ -2.47
RGPD6-209ENST00000480894 PCLOQ9Y6V0 5065 aa-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 EPRSP07814 1512 aaKnown RBP-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 FLNAP21333 2647 aaKnown RBP-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 H1FX-AS1Q4G0G2 97 aa-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 HIGD1BQ9P298 99 aa-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 ZANQ9Y493 2812 aa-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
RGPD6-209ENST00000480894 HERC2O95714 4834 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 GYPAP02724 150 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 IGLC2P0DOY2 106 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 IGLC3P0DOY3 106 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 ATRQ13535 2644 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 MON2Q7Z3U7 1717 aa-0.38□□□□□ -2.47
RGPD6-209ENST00000480894 STARD9Q9P2P6 4700 aa-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 MAP1AP78559 2803 aaPredicted RBP-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 MRPL34Q9BQ48 92 aaKnown RBP-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 FLGP20930 4061 aaPredicted RBP-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 CUX1P39880 1505 aa-0.39□□□□□ -2.47
RGPD6-209ENST00000480894 PKD1P98161 4303 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 CLTCQ00610 1675 aaKnown RBP-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 FANCAO15360 1455 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 IQSEC2Q5JU85 1478 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 SPTA1P02549 2419 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 EP300Q09472 2414 aaPredicted RBP-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 SPTY2D1-AS1A0A0U1RR47 76 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 DNAH6Q9C0G6 4158 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 C5P01031 1676 aa-0.4□□□□□ -2.47
RGPD6-209ENST00000480894 KIAA1551Q9HCM1 1747 aa-0.41□□□□□ -2.47
RGPD6-209ENST00000480894 PDZD2O15018 2839 aa-0.41□□□□□ -2.48
RGPD6-209ENST00000480894 WNK1Q9H4A3 2382 aa-0.41□□□□□ -2.48
RGPD6-209ENST00000480894 ATP10BO94823 1461 aa-0.41□□□□□ -2.48
RGPD6-209ENST00000480894 EPPK1P58107 5090 aaKnown RBP-0.42□□□□□ -2.48
RGPD6-209ENST00000480894 CCL22O00626 93 aa-0.42□□□□□ -2.48
RGPD6-209ENST00000480894 SMIM11AP58511 58 aa-0.42□□□□□ -2.48
RGPD6-209ENST00000480894 C20orf78Q9BR46 151 aa-0.42□□□□□ -2.48
RGPD6-209ENST00000480894 UBE2D4Q9Y2X8 147 aa-0.42□□□□□ -2.48
RGPD6-209ENST00000480894 CHD8Q9HCK8 2581 aa-0.43□□□□□ -2.48
RGPD6-209ENST00000480894 ANKRD26Q9UPS8 1709 aa-0.44□□□□□ -2.48
RGPD6-209ENST00000480894 ACANP16112 2415 aa-0.44□□□□□ -2.48
RGPD6-209ENST00000480894 LAMA5O15230 3695 aa-0.44□□□□□ -2.48
RGPD6-209ENST00000480894 DEFB112Q30KQ8 113 aa-0.44□□□□□ -2.48
RGPD6-209ENST00000480894 CCNB3Q8WWL7 1395 aa-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 SVEP1Q4LDE5 3571 aa-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 CLIP1P30622 1438 aa-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 HMGN2P05204 90 aaKnown RBP-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 VPS13DQ5THJ4 4388 aa-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 TGP01266 2768 aa-0.45□□□□□ -2.48
RGPD6-209ENST00000480894 HYDINQ4G0P3 5121 aa-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 MYH4Q9Y623 1939 aa-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 CRYBG1Q9Y4K1 1723 aa-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 NF1P21359 2839 aa-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 SETXQ7Z333 2677 aaKnown RBP-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 RYR1P21817 5038 aa-0.46□□□□□ -2.48
RGPD6-209ENST00000480894 AKAP12Q02952 1782 aa-0.47□□□□□ -2.48
RGPD6-209ENST00000480894 PEA15Q15121 130 aa-0.47□□□□□ -2.48
RGPD6-209ENST00000480894 TROQ12816 1431 aaPredicted RBP-0.47□□□□□ -2.49
RGPD6-209ENST00000480894 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
RGPD6-209ENST00000480894 HEPN1Q6WQI6 88 aa-0.48□□□□□ -2.49
RGPD6-209ENST00000480894 CDKN2A-AS1Q9UH64 79 aa-0.48□□□□□ -2.49
RGPD6-209ENST00000480894 STAB2Q8WWQ8 2551 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 DNAH3Q8TD57 4116 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 RYR2Q92736 4967 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 RNF213Q63HN8 5207 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 KIF20BQ96Q89 1820 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 NMSQ5H8A3 153 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 PYY3Q5JQD4 70 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 DNAH9Q9NYC9 4486 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 BIRC6Q9NR09 4857 aa-0.49□□□□□ -2.49
RGPD6-209ENST00000480894 NBEAL1Q6ZS30 2694 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 MUC17Q685J3 4493 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 DEFB135Q30KP9 77 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 KRTAP20-2Q3LI61 65 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 KRTAP6-2Q3LI66 62 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 Q9H521 79 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 FAT3Q8TDW7 4589 aa-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 COL14A1Q05707 1796 aaKnown RBP-0.5□□□□□ -2.49
RGPD6-209ENST00000480894 CNOT1A5YKK6 2376 aaKnown RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms