RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
RGPD6-209ENST00000480894 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
RGPD6-209ENST00000480894 SENP3Q9H4L4 574 aaPredicted RBP28.18■■■□□ 2.1
RGPD6-209ENST00000480894 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
RGPD6-209ENST00000480894 FOXD1Q16676 465 aa26.3■■□□□ 1.8
RGPD6-209ENST00000480894 POTEDQ86YR6 584 aa24.82■■□□□ 1.56
RGPD6-209ENST00000480894 MSH5O43196 834 aa24.71■■□□□ 1.55
RGPD6-209ENST00000480894 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
RGPD6-209ENST00000480894 PIAS4Q8N2W9 510 aaPredicted RBP24.5■■□□□ 1.51
RGPD6-209ENST00000480894 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
RGPD6-209ENST00000480894 ADRA2BP18089 450 aa24.28■■□□□ 1.48
RGPD6-209ENST00000480894 MAPK8IP2Q13387 824 aaPredicted RBP22.38■■□□□ 1.17
RGPD6-209ENST00000480894 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
RGPD6-209ENST00000480894 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
RGPD6-209ENST00000480894 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
RGPD6-209ENST00000480894 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
RGPD6-209ENST00000480894 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
RGPD6-209ENST00000480894 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
RGPD6-209ENST00000480894 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
RGPD6-209ENST00000480894 RNF216Q9NWF9 866 aaPredicted RBP21.14■□□□□ 0.97
RGPD6-209ENST00000480894 RNF39Q9H2S5 420 aa21.08■□□□□ 0.97
RGPD6-209ENST00000480894 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
RGPD6-209ENST00000480894 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
RGPD6-209ENST00000480894 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
RGPD6-209ENST00000480894 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
RGPD6-209ENST00000480894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
RGPD6-209ENST00000480894 U3KPZ7 1027 aaPredicted RBP19.91■□□□□ 0.78
RGPD6-209ENST00000480894 KCNA4P22459 653 aa19.75■□□□□ 0.75
RGPD6-209ENST00000480894 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
RGPD6-209ENST00000480894 CAPN15O75808 1086 aa19.67■□□□□ 0.74
RGPD6-209ENST00000480894 DSG3P32926 999 aa19.63■□□□□ 0.73
RGPD6-209ENST00000480894 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
RGPD6-209ENST00000480894 POTEHQ6S545 545 aa19.34■□□□□ 0.69
RGPD6-209ENST00000480894 APLP2Q06481 763 aa19.31■□□□□ 0.68
RGPD6-209ENST00000480894 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
RGPD6-209ENST00000480894 ZNF219Q9P2Y4 722 aaPredicted RBP19.25■□□□□ 0.67
RGPD6-209ENST00000480894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
RGPD6-209ENST00000480894 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
RGPD6-209ENST00000480894 ABCB7O75027 752 aa19.2■□□□□ 0.66
RGPD6-209ENST00000480894 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
RGPD6-209ENST00000480894 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
RGPD6-209ENST00000480894 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
RGPD6-209ENST00000480894 POLA2Q14181 598 aa18.71■□□□□ 0.59
RGPD6-209ENST00000480894 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
RGPD6-209ENST00000480894 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
RGPD6-209ENST00000480894 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
RGPD6-209ENST00000480894 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
RGPD6-209ENST00000480894 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
RGPD6-209ENST00000480894 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
RGPD6-209ENST00000480894 ZBTB22O15209 634 aa18.16■□□□□ 0.5
RGPD6-209ENST00000480894 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
RGPD6-209ENST00000480894 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
RGPD6-209ENST00000480894 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
RGPD6-209ENST00000480894 PIP4P2Q8N4L2 257 aa17.95■□□□□ 0.46
RGPD6-209ENST00000480894 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
RGPD6-209ENST00000480894 SP7Q8TDD2 431 aaPredicted RBP17.89■□□□□ 0.45
RGPD6-209ENST00000480894 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
RGPD6-209ENST00000480894 FBLN2P98095 1184 aa17.74■□□□□ 0.43
RGPD6-209ENST00000480894 SPDYE2BA6NHP3 402 aa17.73■□□□□ 0.43
RGPD6-209ENST00000480894 SPDYE6P0CI01 402 aa17.73■□□□□ 0.43
RGPD6-209ENST00000480894 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
RGPD6-209ENST00000480894 HAX1O00165 279 aa17.67■□□□□ 0.42
RGPD6-209ENST00000480894 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
RGPD6-209ENST00000480894 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
RGPD6-209ENST00000480894 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
RGPD6-209ENST00000480894 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
RGPD6-209ENST00000480894 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
RGPD6-209ENST00000480894 EVX2Q03828 476 aa17.45■□□□□ 0.38
RGPD6-209ENST00000480894 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
RGPD6-209ENST00000480894 C19orf67A6NJJ6 358 aa17.24■□□□□ 0.35
RGPD6-209ENST00000480894 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
RGPD6-209ENST00000480894 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
RGPD6-209ENST00000480894 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
RGPD6-209ENST00000480894 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
RGPD6-209ENST00000480894 GABBR2O75899 941 aa17.05■□□□□ 0.32
RGPD6-209ENST00000480894 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
RGPD6-209ENST00000480894 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
RGPD6-209ENST00000480894 LHX8Q68G74 356 aa16.77■□□□□ 0.28
RGPD6-209ENST00000480894 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
RGPD6-209ENST00000480894 CLCN6P51797 869 aa16.68■□□□□ 0.26
RGPD6-209ENST00000480894 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
RGPD6-209ENST00000480894 CREBZFQ9NS37 354 aa16.66■□□□□ 0.26
RGPD6-209ENST00000480894 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
RGPD6-209ENST00000480894 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
RGPD6-209ENST00000480894 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
RGPD6-209ENST00000480894 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
RGPD6-209ENST00000480894 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
RGPD6-209ENST00000480894 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
RGPD6-209ENST00000480894 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
RGPD6-209ENST00000480894 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
RGPD6-209ENST00000480894 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
RGPD6-209ENST00000480894 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
RGPD6-209ENST00000480894 PROM2Q8N271 834 aa16.19■□□□□ 0.18
RGPD6-209ENST00000480894 PLSCR2Q9NRY7 297 aa16.19■□□□□ 0.18
RGPD6-209ENST00000480894 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
RGPD6-209ENST00000480894 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
RGPD6-209ENST00000480894 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
RGPD6-209ENST00000480894 MS4A3Q96HJ5 214 aa16.1■□□□□ 0.17
RGPD6-209ENST00000480894 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
RGPD6-209ENST00000480894 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms