RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 ATP7BP35670 1465 aa0.27□□□□□ -2.37
VLDLR-204ENST00000478776 PKDREJQ9NTG1 2253 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 PLGLAQ15195 96 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 LINC00643Q86TS7 51 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 CRIPTQ9P021 101 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 TMEM131LA2VDJ0 1609 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 COL14A1Q05707 1796 aaKnown RBP0.26□□□□□ -2.37
VLDLR-204ENST00000478776 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
VLDLR-204ENST00000478776 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
VLDLR-204ENST00000478776 MAST4O15021 2626 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 AKAP6Q13023 2319 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 QSER1Q2KHR3 1735 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 LRRC9Q6ZRR7 1453 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 IQCF6A8MYZ5 107 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 VWFP04275 2813 aa0.25□□□□□ -2.37
VLDLR-204ENST00000478776 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
VLDLR-204ENST00000478776 KMT2DO14686 5537 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 SCRIBQ14160 1630 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 CCDC18Q5T9S5 1454 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
VLDLR-204ENST00000478776 MYMXA0A1B0GTQ4 84 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 A0A1B0GUT8 65 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 I3L3M4 83 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 ACYP1P07311 99 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 DEFB112Q30KQ8 113 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 TDRG1Q3Y452 100 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
VLDLR-204ENST00000478776 SUPT6HQ7KZ85 1726 aaKnown RBP0.24□□□□□ -2.37
VLDLR-204ENST00000478776 FSIP2Q5CZC0 6907 aa0.23□□□□□ -2.37
VLDLR-204ENST00000478776 MAGI2Q86UL8 1455 aa0.23□□□□□ -2.37
VLDLR-204ENST00000478776 CPSF4LA6NMK7 179 aaKnown RBP0.23□□□□□ -2.37
VLDLR-204ENST00000478776 DEFB105AQ8NG35 78 aa0.23□□□□□ -2.37
VLDLR-204ENST00000478776 RGPD1P0DJD0 1748 aa0.23□□□□□ -2.37
VLDLR-204ENST00000478776 SPTBN1Q01082 2364 aaKnown RBP0.23□□□□□ -2.37
VLDLR-204ENST00000478776 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
VLDLR-204ENST00000478776 SPTY2D1-AS1A0A0U1RR47 76 aa0.22□□□□□ -2.37
VLDLR-204ENST00000478776 SPINK4O60575 86 aa0.22□□□□□ -2.37
VLDLR-204ENST00000478776 LRRC7Q96NW7 1537 aa0.22□□□□□ -2.37
VLDLR-204ENST00000478776 RGPD2P0DJD1 1756 aa0.22□□□□□ -2.37
VLDLR-204ENST00000478776 UBR3Q6ZT12 1888 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 GVINP1Q7Z2Y8 2422 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 KANTRA0A1W2PQU2 76 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 BCORQ6W2J9 1755 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 CHD6Q8TD26 2715 aa0.21□□□□□ -2.38
VLDLR-204ENST00000478776 CELSR1Q9NYQ6 3014 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 CEBPZOSA8MTT3 80 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 COX7BP24311 80 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 MRPL34Q9BQ48 92 aaKnown RBP0.2□□□□□ -2.38
VLDLR-204ENST00000478776 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 NCOR1O75376 2440 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 HIVEP3Q5T1R4 2406 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 CLIP1P30622 1438 aa0.2□□□□□ -2.38
VLDLR-204ENST00000478776 ARHGAP35Q9NRY4 1499 aa0.19□□□□□ -2.38
VLDLR-204ENST00000478776 CCL22O00626 93 aa0.19□□□□□ -2.38
VLDLR-204ENST00000478776 APLNQ9ULZ1 77 aa0.19□□□□□ -2.38
VLDLR-204ENST00000478776 LTN1O94822 1766 aa0.19□□□□□ -2.38
VLDLR-204ENST00000478776 DIP2BQ9P265 1576 aa0.19□□□□□ -2.38
VLDLR-204ENST00000478776 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 POLR1AO95602 1720 aaPredicted RBP0.18□□□□□ -2.38
VLDLR-204ENST00000478776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.18□□□□□ -2.38
VLDLR-204ENST00000478776 DCAF1Q9Y4B6 1507 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 HUWE1Q7Z6Z7 4374 aaKnown RBP0.18□□□□□ -2.38
VLDLR-204ENST00000478776 PREX1Q8TCU6 1659 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 KLK9Q2XQG4 91 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 S100A13Q99584 98 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 ST20Q9HBF5 79 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 TIAM2Q8IVF5 1701 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 PKD1L1Q8TDX9 2849 aa0.18□□□□□ -2.38
VLDLR-204ENST00000478776 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
VLDLR-204ENST00000478776 ERVK-7P63135 1459 aa0.17□□□□□ -2.38
VLDLR-204ENST00000478776 ADIRFQ15847 76 aa0.17□□□□□ -2.38
VLDLR-204ENST00000478776 GAFA1Q96PS6 74 aa0.17□□□□□ -2.38
VLDLR-204ENST00000478776 URB2Q14146 1524 aaKnown RBP0.17□□□□□ -2.38
VLDLR-204ENST00000478776 RGPD8O14715 1765 aaPredicted RBP0.17□□□□□ -2.38
VLDLR-204ENST00000478776 RGPD5Q99666 1765 aa0.17□□□□□ -2.38
VLDLR-204ENST00000478776 USP32Q8NFA0 1604 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 CEP170BQ9Y4F5 1589 aaPredicted RBP0.16□□□□□ -2.38
VLDLR-204ENST00000478776 TRAV21A0A0B4J279 112 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 NDUFB1O75438 58 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 RPL38P63173 70 aaKnown RBP0.16□□□□□ -2.38
VLDLR-204ENST00000478776 H1FX-AS1Q4G0G2 97 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 PTPN13Q12923 2485 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 ABCA2Q9BZC7 2435 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 MYCBP2O75592 4640 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 PIK3C2BO00750 1634 aa0.16□□□□□ -2.38
VLDLR-204ENST00000478776 TNXBP22105 4242 aa0.15□□□□□ -2.39
VLDLR-204ENST00000478776 MAGI3Q5TCQ9 1506 aa0.15□□□□□ -2.39
VLDLR-204ENST00000478776 KDM5DQ9BY66 1539 aa0.15□□□□□ -2.39
VLDLR-204ENST00000478776 PRM1P04553 51 aa0.15□□□□□ -2.39
VLDLR-204ENST00000478776 KMT2AQ03164 3969 aa0.15□□□□□ -2.39
VLDLR-204ENST00000478776 ZNF831Q5JPB2 1677 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 CSPG4Q6UVK1 2322 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 ATRQ13535 2644 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 WFDC9Q8NEX5 89 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 CFAP74Q9C0B2 1584 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 CACNA1AO00555 2505 aa0.14□□□□□ -2.39
VLDLR-204ENST00000478776 FAT2Q9NYQ8 4349 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms