RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 ICOSQ9Y6W8 199 aa3.53□□□□□ -1.84
CCDC66-211ENST00000468108 DEFB131BA0A096LNP1 70 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 A0A096LPF7 62 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 A0A0J9YXV3 536 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 C9JAW5 83 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 NDUFA1O15239 70 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 SNCGO76070 127 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 HERVK_113P63121 156 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-211ENST00000468108 LYPD5Q6UWN5 251 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 UBE2WQ96B02 151 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 CARD19Q96LW7 228 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 OPRPNQ99935 248 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-211ENST00000468108 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
CCDC66-211ENST00000468108 DYNC2H1Q8NCM8 4307 aaKnown RBP3.52□□□□□ -1.85
CCDC66-211ENST00000468108 TRAV8-4A0A0B4J246 113 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 LST1O00453 97 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 XGP55808 180 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 HERV-K104P63124 156 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 LELP1Q5T871 98 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 C15orf53Q8NAA6 179 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
CCDC66-211ENST00000468108 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 GAGE2BQ13066 116 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 GAGE2EQ4V326 116 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 C2orf82Q6UX34 121 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 GAGE2DQ9UEU5 116 aa3.5□□□□□ -1.85
CCDC66-211ENST00000468108 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 COX7A2LO14548 114 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 TRACP01848 142 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 TTC32Q5I0X7 151 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
CCDC66-211ENST00000468108 TRBV7-7A0A0K0K1E9 115 aa3.48□□□□□ -1.85
CCDC66-211ENST00000468108 SS18Q15532 418 aa3.48□□□□□ -1.85
CCDC66-211ENST00000468108 ESRGQ1W209 222 aa3.48□□□□□ -1.85
CCDC66-211ENST00000468108 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
CCDC66-211ENST00000468108 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
CCDC66-211ENST00000468108 NBEAL1Q6ZS30 2694 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 IGHV3-64A0A075B6Q5 118 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 A0A087X002 238 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 TRAV8-3A0A0A6YYJ7 113 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 TRAV13-2A0A0B4J235 113 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 H7C2G1 150 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 INAFM2P0DMQ5 153 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 CCL18P55774 89 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
CCDC66-211ENST00000468108 COX6A2Q02221 97 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 ADAMTSL4-AS1Q5T5F5 129 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 LINC01561Q8N1V8 128 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 LINC00308Q8TCZ7 52 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 DNAH7Q8WXX0 4024 aa3.47□□□□□ -1.85
CCDC66-211ENST00000468108 NOTCH1P46531 2555 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 COL7A1Q02388 2944 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 TEX49A0A1B0GTD5 131 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 ANGP03950 147 aaKnown RBP3.46□□□□□ -1.86
CCDC66-211ENST00000468108 CXCL5P42830 114 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 REG3AQ06141 175 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 LINC00269Q8N2A0 174 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 DAND5Q8N907 189 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-211ENST00000468108 Q9H8V8 135 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 PRR34Q9NV39 138 aa3.46□□□□□ -1.86
CCDC66-211ENST00000468108 A0A087WZ39 114 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 IGLV9-49A0A0B4J1Y8 123 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 IGKV3OR2-268A0A0C4DH90 116 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 NUPR2A6NF83 97 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 H0YGX0 51 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 RPL28P46779 137 aaKnown RBP3.45□□□□□ -1.86
CCDC66-211ENST00000468108 LINC01556Q5JQF7 62 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 LINC00643Q86TS7 51 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 UPK3BQ9BT76 320 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 APLNQ9ULZ1 77 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 KLK5Q9Y337 293 aaPredicted RBP3.45□□□□□ -1.86
CCDC66-211ENST00000468108 TENM3Q9P273 2699 aa3.45□□□□□ -1.86
CCDC66-211ENST00000468108 MGAM2Q2M2H8 2515 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 A0A1B0GX51 115 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 CRPP02741 224 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 ENHOQ6UWT2 76 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 TMEM126AQ9H061 195 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 LINC00588Q9Y4M8 146 aa3.44□□□□□ -1.86
CCDC66-211ENST00000468108 PRKDCP78527 4128 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms