RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ATP7BP35670 1465 aa0.41□□□□□ -2.34
SYPL1-203ENST00000460770 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.41□□□□□ -2.34
SYPL1-203ENST00000460770 SPTA1P02549 2419 aa0.4□□□□□ -2.34
SYPL1-203ENST00000460770 SAMD9Q5K651 1589 aa0.4□□□□□ -2.34
SYPL1-203ENST00000460770 BDP1A6H8Y1 2624 aa0.4□□□□□ -2.34
SYPL1-203ENST00000460770 CNOT1A5YKK6 2376 aaKnown RBP0.4□□□□□ -2.34
SYPL1-203ENST00000460770 CLIP1P30622 1438 aa0.4□□□□□ -2.34
SYPL1-203ENST00000460770 URB2Q14146 1524 aaKnown RBP0.4□□□□□ -2.35
SYPL1-203ENST00000460770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.4□□□□□ -2.35
SYPL1-203ENST00000460770 SMIM31A0A1B0GVY4 71 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 NREPQ16612 68 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 DEFB109BQ30KR1 87 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 KRTAP19-3Q7Z4W3 81 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 DEFB105AQ8NG35 78 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 MRPL34Q9BQ48 92 aaKnown RBP0.4□□□□□ -2.35
SYPL1-203ENST00000460770 CDKN2A-AS1Q9UH64 79 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 LRRC9Q6ZRR7 1453 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 PPLO60437 1756 aa0.4□□□□□ -2.35
SYPL1-203ENST00000460770 DCAF1Q9Y4B6 1507 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 MYO3AQ8NEV4 1616 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 A0A0G2JMZ2 1700 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 KIF20BQ96Q89 1820 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 SPRR1AP35321 89 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 ATXN8Q156A1 80 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 CSPG4Q6UVK1 2322 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 NKTRP30414 1462 aaKnown RBP0.39□□□□□ -2.35
SYPL1-203ENST00000460770 NCOA2Q15596 1464 aa0.39□□□□□ -2.35
SYPL1-203ENST00000460770 DUOX2Q9NRD8 1548 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 XRN1Q8IZH2 1706 aaKnown RBP0.38□□□□□ -2.35
SYPL1-203ENST00000460770 NDUFA4O00483 81 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 KLK9Q2XQG4 91 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 Q5VSD8 79 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 HILPDAQ9Y5L2 63 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 PDE4DIPQ5VU43 2346 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 KNL1Q8NG31 2342 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 CRYBG1Q9Y4K1 1723 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 KIAA0556O60303 1618 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 PAPPAQ13219 1627 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 MAP3K4Q9Y6R4 1608 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 ZFHX3Q15911 3703 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 TULP4Q9NRJ4 1543 aa0.38□□□□□ -2.35
SYPL1-203ENST00000460770 C5P01031 1676 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 POLQO75417 2590 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 LOC730098B7Z3J9 87 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 MRPL33O75394 65 aaKnown RBP0.37□□□□□ -2.35
SYPL1-203ENST00000460770 H1FX-AS1Q4G0G2 97 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 S100ZQ8WXG8 99 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 UBL5Q9BZL1 73 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 U3KQA8 63 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 LAMC1P11047 1609 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 PIEZO1Q92508 2521 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 LRRC7Q96NW7 1537 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 PAPPA2Q9BXP8 1791 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 PTPN13Q12923 2485 aa0.37□□□□□ -2.35
SYPL1-203ENST00000460770 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 TARBP1Q13395 1621 aaKnown RBP0.36□□□□□ -2.35
SYPL1-203ENST00000460770 NDUFA3O95167 84 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 PRH1P02810 166 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 C3orf79P0CE67 100 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 ENHOQ6UWT2 76 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 COX6B2Q6YFQ2 88 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 PRO3102Q9H379 93 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 SLIT1O75093 1534 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 SHPRHQ149N8 1683 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 NCOR1O75376 2440 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 MEGF8Q7Z7M0 2845 aa0.36□□□□□ -2.35
SYPL1-203ENST00000460770 MAP1BP46821 2468 aaKnown RBP0.36□□□□□ -2.35
SYPL1-203ENST00000460770 LRRC37AA6NMS7 1700 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 UBR1Q8IWV7 1749 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 MAP3K1Q13233 1512 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 NAV2Q8IVL1 2488 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 A0A087WWC5 75 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 SMIM5Q71RC9 77 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 WFDC13Q8IUB5 93 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 TSC2P49815 1807 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 NHSL1Q5SYE7 1610 aa0.35□□□□□ -2.35
SYPL1-203ENST00000460770 APCP25054 2843 aa0.34□□□□□ -2.35
SYPL1-203ENST00000460770 UGGT2Q9NYU1 1516 aa0.34□□□□□ -2.35
SYPL1-203ENST00000460770 ZNF292O60281 2723 aa0.34□□□□□ -2.35
SYPL1-203ENST00000460770 LINC00158P58513 81 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 PKD1L3Q7Z443 1732 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 SMR3AQ99954 134 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 DIP2BQ9P265 1576 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 ANKRD50Q9ULJ7 1429 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 WNK1Q9H4A3 2382 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 RGPD2P0DJD1 1756 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.36
SYPL1-203ENST00000460770 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
SYPL1-203ENST00000460770 ANK2Q01484 3957 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 ABCA2Q9BZC7 2435 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 LCE6AA0A183 80 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 LINC01549A6NIU2 74 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 BIVM-ERCC5R4GMW8 1640 aa0.33□□□□□ -2.36
SYPL1-203ENST00000460770 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms