RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
SYPL1-203ENST00000460770 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
SYPL1-203ENST00000460770 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
SYPL1-203ENST00000460770 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
SYPL1-203ENST00000460770 FOXD1Q16676 465 aa14.81□□□□□ -0.04
SYPL1-203ENST00000460770 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
SYPL1-203ENST00000460770 MSH5O43196 834 aa13.97□□□□□ -0.17
SYPL1-203ENST00000460770 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
SYPL1-203ENST00000460770 ADRA2BP18089 450 aa13.89□□□□□ -0.19
SYPL1-203ENST00000460770 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
SYPL1-203ENST00000460770 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
SYPL1-203ENST00000460770 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
SYPL1-203ENST00000460770 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
SYPL1-203ENST00000460770 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-203ENST00000460770 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
SYPL1-203ENST00000460770 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
SYPL1-203ENST00000460770 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
SYPL1-203ENST00000460770 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
SYPL1-203ENST00000460770 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
SYPL1-203ENST00000460770 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
SYPL1-203ENST00000460770 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
SYPL1-203ENST00000460770 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
SYPL1-203ENST00000460770 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
SYPL1-203ENST00000460770 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
SYPL1-203ENST00000460770 KCNA4P22459 653 aa11.83□□□□□ -0.52
SYPL1-203ENST00000460770 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
SYPL1-203ENST00000460770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYPL1-203ENST00000460770 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
SYPL1-203ENST00000460770 APLP2Q06481 763 aa11.37□□□□□ -0.59
SYPL1-203ENST00000460770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
SYPL1-203ENST00000460770 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
SYPL1-203ENST00000460770 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
SYPL1-203ENST00000460770 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
SYPL1-203ENST00000460770 CAPN15O75808 1086 aa11.27□□□□□ -0.61
SYPL1-203ENST00000460770 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
SYPL1-203ENST00000460770 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
SYPL1-203ENST00000460770 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
SYPL1-203ENST00000460770 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
SYPL1-203ENST00000460770 DSG3P32926 999 aa11.11□□□□□ -0.63
SYPL1-203ENST00000460770 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
SYPL1-203ENST00000460770 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
SYPL1-203ENST00000460770 ABCB7O75027 752 aa10.95□□□□□ -0.66
SYPL1-203ENST00000460770 POLA2Q14181 598 aa10.82□□□□□ -0.68
SYPL1-203ENST00000460770 ZBTB22O15209 634 aa10.8□□□□□ -0.68
SYPL1-203ENST00000460770 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
SYPL1-203ENST00000460770 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
SYPL1-203ENST00000460770 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
SYPL1-203ENST00000460770 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
SYPL1-203ENST00000460770 POTEHQ6S545 545 aa10.59□□□□□ -0.71
SYPL1-203ENST00000460770 FBLN2P98095 1184 aa10.53□□□□□ -0.72
SYPL1-203ENST00000460770 CSRNP3Q8WYN3 585 aa10.47□□□□□ -0.73
SYPL1-203ENST00000460770 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
SYPL1-203ENST00000460770 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
SYPL1-203ENST00000460770 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
SYPL1-203ENST00000460770 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
SYPL1-203ENST00000460770 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
SYPL1-203ENST00000460770 SPDYE2Q495Y8 402 aa10.37□□□□□ -0.75
SYPL1-203ENST00000460770 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
SYPL1-203ENST00000460770 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
SYPL1-203ENST00000460770 MKRN4PQ13434 485 aaPredicted RBP10.25□□□□□ -0.77
SYPL1-203ENST00000460770 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
SYPL1-203ENST00000460770 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
SYPL1-203ENST00000460770 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
SYPL1-203ENST00000460770 SSUH2Q9Y2M2 353 aa10.17□□□□□ -0.78
SYPL1-203ENST00000460770 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
SYPL1-203ENST00000460770 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
SYPL1-203ENST00000460770 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.85e-6■□□□□ 9.5
SYPL1-203ENST00000460770 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
SYPL1-203ENST00000460770 PRR29P0C7W0 189 aa9.98□□□□□ -0.81
SYPL1-203ENST00000460770 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.82
SYPL1-203ENST00000460770 HAX1O00165 279 aa9.95□□□□□ -0.82
SYPL1-203ENST00000460770 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
SYPL1-203ENST00000460770 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
SYPL1-203ENST00000460770 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
SYPL1-203ENST00000460770 CHADLQ6NUI6 762 aa9.8□□□□□ -0.84
SYPL1-203ENST00000460770 C19orf67A6NJJ6 358 aa9.75□□□□□ -0.85
SYPL1-203ENST00000460770 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
SYPL1-203ENST00000460770 PROM2Q8N271 834 aa9.68□□□□□ -0.86
SYPL1-203ENST00000460770 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
SYPL1-203ENST00000460770 EVX2Q03828 476 aa9.67□□□□□ -0.86
SYPL1-203ENST00000460770 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
SYPL1-203ENST00000460770 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYPL1-203ENST00000460770 CLCN6P51797 869 aa9.65□□□□□ -0.86
SYPL1-203ENST00000460770 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
SYPL1-203ENST00000460770 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
SYPL1-203ENST00000460770 GABBR2O75899 941 aa9.57□□□□□ -0.88
SYPL1-203ENST00000460770 FKBP8Q14318 412 aa9.56□□□□□ -0.88
SYPL1-203ENST00000460770 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
SYPL1-203ENST00000460770 MIER1Q8N108 512 aa9.52□□□□□ -0.89
SYPL1-203ENST00000460770 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
SYPL1-203ENST00000460770 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
SYPL1-203ENST00000460770 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
SYPL1-203ENST00000460770 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
SYPL1-203ENST00000460770 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
SYPL1-203ENST00000460770 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
SYPL1-203ENST00000460770 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
SYPL1-203ENST00000460770 PHF12Q96QT6 1004 aa9.36□□□□□ -0.91
SYPL1-203ENST00000460770 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
SYPL1-203ENST00000460770 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
SYPL1-203ENST00000460770 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms