RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 COX7A2LO14548 114 aa8.19□□□□□ -1.1
SYNE2-207ENST00000458046 PSPHP1O15172 72 aa8.18□□□□□ -1.1
SYNE2-207ENST00000458046 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
SYNE2-207ENST00000458046 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
SYNE2-207ENST00000458046 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
SYNE2-207ENST00000458046 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
SYNE2-207ENST00000458046 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-207ENST00000458046 TRACP01848 142 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 CHCHD5Q9BSY4 110 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
SYNE2-207ENST00000458046 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
SYNE2-207ENST00000458046 TMEM256-PLSCR3K7ERE1 68 aa8.15□□□□□ -1.1
SYNE2-207ENST00000458046 IGLV1-51P01701 117 aa8.15□□□□□ -1.1
SYNE2-207ENST00000458046 DEFB130BP0DP73 79 aa8.15□□□□□ -1.11
SYNE2-207ENST00000458046 DEFB130AP0DP74 79 aa8.15□□□□□ -1.11
SYNE2-207ENST00000458046 FHL2Q14192 279 aa8.15□□□□□ -1.11
SYNE2-207ENST00000458046 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.11
SYNE2-207ENST00000458046 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 LINC00158P58513 81 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 LCA10Q71F78 164 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 C5orf38Q86SI9 138 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 IGHV4-30-4P0DP06 118 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 CMC4P56277 68 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-207ENST00000458046 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
SYNE2-207ENST00000458046 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
SYNE2-207ENST00000458046 SS18Q15532 418 aa8.13□□□□□ -1.11
SYNE2-207ENST00000458046 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
SYNE2-207ENST00000458046 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
SYNE2-207ENST00000458046 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
SYNE2-207ENST00000458046 CRPP02741 224 aa8.11□□□□□ -1.11
SYNE2-207ENST00000458046 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-207ENST00000458046 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
SYNE2-207ENST00000458046 RNASE1P07998 156 aaKnown RBP8.11□□□□□ -1.11
SYNE2-207ENST00000458046 KRTAP1-1Q07627 177 aa8.11□□□□□ -1.11
SYNE2-207ENST00000458046 A0A096LPF7 62 aa8.1□□□□□ -1.11
SYNE2-207ENST00000458046 CCL18P55774 89 aa8.1□□□□□ -1.11
SYNE2-207ENST00000458046 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
SYNE2-207ENST00000458046 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
SYNE2-207ENST00000458046 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
SYNE2-207ENST00000458046 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
SYNE2-207ENST00000458046 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
SYNE2-207ENST00000458046 XCL1P47992 114 aa8.08□□□□□ -1.12
SYNE2-207ENST00000458046 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
SYNE2-207ENST00000458046 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
SYNE2-207ENST00000458046 VWFP04275 2813 aa8.08□□□□□ -1.12
SYNE2-207ENST00000458046 A0A087WYN8 130 aa8.07□□□□□ -1.12
SYNE2-207ENST00000458046 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
SYNE2-207ENST00000458046 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 LINC00588Q9Y4M8 146 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 RYR3Q15413 4870 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 IBA57-AS1B1ANH7 110 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 ACYP1P07311 99 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 SMR3AQ99954 134 aa8.06□□□□□ -1.12
SYNE2-207ENST00000458046 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
SYNE2-207ENST00000458046 DNAL4O96015 105 aa8.05□□□□□ -1.12
SYNE2-207ENST00000458046 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
SYNE2-207ENST00000458046 KRTAP24-1Q3LI83 254 aa8.05□□□□□ -1.12
SYNE2-207ENST00000458046 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
SYNE2-207ENST00000458046 COX7CP15954 63 aa8.04□□□□□ -1.12
SYNE2-207ENST00000458046 NOTCH1P46531 2555 aa8.04□□□□□ -1.12
SYNE2-207ENST00000458046 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
SYNE2-207ENST00000458046 DEFB4AO15263 64 aa8.04□□□□□ -1.12
SYNE2-207ENST00000458046 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
SYNE2-207ENST00000458046 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
SYNE2-207ENST00000458046 LECT2O14960 151 aa8.03□□□□□ -1.12
SYNE2-207ENST00000458046 SLPIP03973 132 aa8.03□□□□□ -1.12
SYNE2-207ENST00000458046 CXCL5P42830 114 aa8.03□□□□□ -1.12
SYNE2-207ENST00000458046 LINC00643Q86TS7 51 aa8.02□□□□□ -1.13
SYNE2-207ENST00000458046 Q8N3U1 123 aa8.01□□□□□ -1.13
SYNE2-207ENST00000458046 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
SYNE2-207ENST00000458046 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
SYNE2-207ENST00000458046 H0YGX0 51 aa8.01□□□□□ -1.13
SYNE2-207ENST00000458046 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
SYNE2-207ENST00000458046 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
SYNE2-207ENST00000458046 LINC00612Q8N6U2 182 aa8□□□□□ -1.13
SYNE2-207ENST00000458046 A0A1B0GUV1 79 aa7.99□□□□□ -1.13
SYNE2-207ENST00000458046 NCR3O14931 201 aa7.99□□□□□ -1.13
SYNE2-207ENST00000458046 MEGF8Q7Z7M0 2845 aa7.99□□□□□ -1.13
SYNE2-207ENST00000458046 Q8IZM0 81 aa7.98□□□□□ -1.13
SYNE2-207ENST00000458046 hADV29S1A0JD25 119 aa7.98□□□□□ -1.13
SYNE2-207ENST00000458046 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
SYNE2-207ENST00000458046 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
SYNE2-207ENST00000458046 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-207ENST00000458046 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
SYNE2-207ENST00000458046 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
SYNE2-207ENST00000458046 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
SYNE2-207ENST00000458046 ANGP03950 147 aaKnown RBP7.97□□□□□ -1.13
SYNE2-207ENST00000458046 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
SYNE2-207ENST00000458046 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
SYNE2-207ENST00000458046 PKD1L1Q8TDX9 2849 aa7.95□□□□□ -1.14
SYNE2-207ENST00000458046 NANOS2P60321 138 aaKnown RBP7.95□□□□□ -1.14
SYNE2-207ENST00000458046 CYSTM1Q9H1C7 97 aa7.95□□□□□ -1.14
SYNE2-207ENST00000458046 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
SYNE2-207ENST00000458046 TRRAPQ9Y4A5 3859 aa7.94□□□□□ -1.14
SYNE2-207ENST00000458046 IGKV3D-7A0A0C4DH55 119 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms