RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 PARP4Q9UKK3 1724 aaKnown RBP1.96□□□□□ -2.1
VPS50-206ENST00000443443 INTS1Q8N201 2190 aaKnown RBP1.96□□□□□ -2.1
VPS50-206ENST00000443443 MROH2AA6NES4 1674 aa1.96□□□□□ -2.1
VPS50-206ENST00000443443 PAPPA2Q9BXP8 1791 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 NESP48681 1621 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 UBR3Q6ZT12 1888 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 FCER1GP30273 86 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 UBE2DNLQ8IWF7 75 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 ABCC6O95255 1503 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 BCORQ6W2J9 1755 aa1.95□□□□□ -2.1
VPS50-206ENST00000443443 RICTORQ6R327 1708 aa1.94□□□□□ -2.1
VPS50-206ENST00000443443 FXYD6P3P58550 94 aa1.94□□□□□ -2.1
VPS50-206ENST00000443443 A0A0G2JMZ2 1700 aa1.94□□□□□ -2.1
VPS50-206ENST00000443443 ERCC6L2Q5T890 1561 aa1.93□□□□□ -2.1
VPS50-206ENST00000443443 UGGT1Q9NYU2 1555 aa1.93□□□□□ -2.1
VPS50-206ENST00000443443 NDUFA4O00483 81 aa1.93□□□□□ -2.1
VPS50-206ENST00000443443 PRB1P04280 392 aa1.93□□□□□ -2.1
VPS50-206ENST00000443443 NCOA6Q14686 2063 aaPredicted RBP1.93□□□□□ -2.1
VPS50-206ENST00000443443 COL14A1Q05707 1796 aaKnown RBP1.93□□□□□ -2.1
VPS50-206ENST00000443443 KMT2BQ9UMN6 2715 aaPredicted RBP1.92□□□□□ -2.1
VPS50-206ENST00000443443 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
VPS50-206ENST00000443443 DEFB119Q8N690 84 aa1.92□□□□□ -2.1
VPS50-206ENST00000443443 TOP2AP11388 1531 aaKnown RBP1.91□□□□□ -2.1
VPS50-206ENST00000443443 FMN2Q9NZ56 1722 aa1.91□□□□□ -2.1
VPS50-206ENST00000443443 MED13LQ71F56 2210 aa1.91□□□□□ -2.1
VPS50-206ENST00000443443 A0A1B0GUL6 1792 aa1.91□□□□□ -2.1
VPS50-206ENST00000443443 CROCC2H7BZ55 1655 aa1.91□□□□□ -2.1
VPS50-206ENST00000443443 TSC2P49815 1807 aa1.9□□□□□ -2.11
VPS50-206ENST00000443443 SPTY2D1-AS1A0A0U1RR47 76 aa1.9□□□□□ -2.11
VPS50-206ENST00000443443 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
VPS50-206ENST00000443443 POLR1AO95602 1720 aaPredicted RBP1.89□□□□□ -2.11
VPS50-206ENST00000443443 MYO7AQ13402 2215 aa1.89□□□□□ -2.11
VPS50-206ENST00000443443 CACNA1GO43497 2377 aa1.89□□□□□ -2.11
VPS50-206ENST00000443443 SLIT1O75093 1534 aa1.89□□□□□ -2.11
VPS50-206ENST00000443443 LRRC37AA6NMS7 1700 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 PRH1P02810 166 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 SERF2P84101 59 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 NCBP2-AS2Q69YL0 99 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 NMES1Q9C002 83 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 NRAPQ86VF7 1730 aa1.88□□□□□ -2.11
VPS50-206ENST00000443443 CPSF4LA6NMK7 179 aaKnown RBP1.87□□□□□ -2.11
VPS50-206ENST00000443443 TOMM5Q8N4H5 51 aa1.87□□□□□ -2.11
VPS50-206ENST00000443443 ADCY10Q96PN6 1610 aa1.87□□□□□ -2.11
VPS50-206ENST00000443443 EFCAB6Q5THR3 1501 aa1.86□□□□□ -2.11
VPS50-206ENST00000443443 ABCA1O95477 2261 aa1.86□□□□□ -2.11
VPS50-206ENST00000443443 BIVM-ERCC5R4GMW8 1640 aa1.86□□□□□ -2.11
VPS50-206ENST00000443443 TULP4Q9NRJ4 1543 aa1.86□□□□□ -2.11
VPS50-206ENST00000443443 DOT1LQ8TEK3 1739 aa1.86□□□□□ -2.11
VPS50-206ENST00000443443 F5P12259 2224 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 K7EIL1 84 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 ANGP03950 147 aaKnown RBP1.85□□□□□ -2.11
VPS50-206ENST00000443443 ARL14EPLP0DKL9 152 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 BAHCC1Q9P281 2608 aa1.85□□□□□ -2.11
VPS50-206ENST00000443443 CACNA1BQ00975 2339 aa1.84□□□□□ -2.11
VPS50-206ENST00000443443 DEFB114Q30KQ6 69 aa1.84□□□□□ -2.11
VPS50-206ENST00000443443 CMC2Q9NRP2 79 aa1.84□□□□□ -2.11
VPS50-206ENST00000443443 CRIPTQ9P021 101 aa1.84□□□□□ -2.11
VPS50-206ENST00000443443 ASCC3Q8N3C0 2202 aaKnown RBP1.83□□□□□ -2.12
VPS50-206ENST00000443443 QSER1Q2KHR3 1735 aa1.83□□□□□ -2.12
VPS50-206ENST00000443443 MRPL33O75394 65 aaKnown RBP1.83□□□□□ -2.12
VPS50-206ENST00000443443 KCNQ1DNQ9H478 68 aa1.83□□□□□ -2.12
VPS50-206ENST00000443443 LY75O60449 1722 aa1.83□□□□□ -2.12
VPS50-206ENST00000443443 NWD1Q149M9 1564 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 ETDCA0A1B0GVM5 59 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 K7EMI3 77 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 PIGYQ3MUY2 71 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 USMG5Q96IX5 58 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 TP53AIP1Q9HCN2 124 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
VPS50-206ENST00000443443 M0R1W7 72 aa1.81□□□□□ -2.12
VPS50-206ENST00000443443 PLNP26678 52 aa1.81□□□□□ -2.12
VPS50-206ENST00000443443 PLXNB2O15031 1838 aa1.81□□□□□ -2.12
VPS50-206ENST00000443443 ABCA5Q8WWZ7 1642 aa1.8□□□□□ -2.12
VPS50-206ENST00000443443 C3P01024 1663 aa1.8□□□□□ -2.12
VPS50-206ENST00000443443 I3L3M4 83 aa1.8□□□□□ -2.12
VPS50-206ENST00000443443 LYNX1P0DP58 116 aa1.8□□□□□ -2.12
VPS50-206ENST00000443443 CACNA1CQ13936 2221 aa1.8□□□□□ -2.12
VPS50-206ENST00000443443 J3QKU1 62 aa1.79□□□□□ -2.12
VPS50-206ENST00000443443 ABCC8Q09428 1581 aa1.78□□□□□ -2.12
VPS50-206ENST00000443443 IQGAP2Q13576 1575 aa1.78□□□□□ -2.12
VPS50-206ENST00000443443 DEFB131BA0A096LNP1 70 aa1.77□□□□□ -2.13
VPS50-206ENST00000443443 CNFNQ9BYD5 112 aa1.77□□□□□ -2.13
VPS50-206ENST00000443443 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
VPS50-206ENST00000443443 KIAA0586Q9BVV6 1533 aa1.76□□□□□ -2.13
VPS50-206ENST00000443443 I3L2K1 104 aa1.76□□□□□ -2.13
VPS50-206ENST00000443443 SPINK9Q5DT21 86 aa1.76□□□□□ -2.13
VPS50-206ENST00000443443 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
VPS50-206ENST00000443443 DEFB123Q8N688 67 aa1.75□□□□□ -2.13
VPS50-206ENST00000443443 ANKRD36CQ5JPF3 1778 aa1.75□□□□□ -2.13
VPS50-206ENST00000443443 TJP1Q07157 1748 aa1.74□□□□□ -2.13
VPS50-206ENST00000443443 CADP27708 2225 aa1.74□□□□□ -2.13
VPS50-206ENST00000443443 NRXN3Q9Y4C0 1643 aa1.74□□□□□ -2.13
VPS50-206ENST00000443443 TECTAO75443 2155 aa1.74□□□□□ -2.13
VPS50-206ENST00000443443 K7EQZ3 153 aa1.74□□□□□ -2.13
VPS50-206ENST00000443443 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
VPS50-206ENST00000443443 CCL22O00626 93 aa1.73□□□□□ -2.13
VPS50-206ENST00000443443 AGLP35573 1532 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms