RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
SIK3-203ENST00000415541 COX6A2Q02221 97 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 FSHBP01225 129 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 NREPQ16612 68 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 C9orf66Q5T8R8 295 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 DEFB135Q30KP9 77 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
SIK3-203ENST00000415541 NOTCH1P46531 2555 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 Q8N3U1 123 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 PRYO14603 147 aa5.52□□□□□ -1.53
SIK3-203ENST00000415541 LYRM9A8MSI8 78 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 ODF3L2Q3SX64 289 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 FBN2P35556 2912 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 H3BQ85 93 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 CCL18P55774 89 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 PROK1P58294 105 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 Q8N814 137 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 Q6ZTI0 123 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 FAM19A3Q7Z5A8 133 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 C11orf72Q8NBR9 251 aa5.51□□□□□ -1.53
SIK3-203ENST00000415541 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
SIK3-203ENST00000415541 Q6ZVQ6 151 aa5.5□□□□□ -1.53
SIK3-203ENST00000415541 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
SIK3-203ENST00000415541 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
SIK3-203ENST00000415541 TM2D3Q9BRN9 247 aa5.5□□□□□ -1.53
SIK3-203ENST00000415541 TRBV6-4A0A1B0GX49 114 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 BPY2O14599 106 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 NBEAL2Q6ZNJ1 2754 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 TRBV10-1A0A0K0K1A3 114 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 APOC4P55056 127 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 HIVEP1P15822 2718 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
SIK3-203ENST00000415541 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 NIPBLQ6KC79 2804 aaeCLIP5.48□□□□□ -1.53
SIK3-203ENST00000415541 A0A087WZ39 114 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 OXLD1Q5BKU9 147 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 Q6ZQT0 140 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 NBEAL1Q6ZS30 2694 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 CR1P17927 2039 aa5.48□□□□□ -1.53
SIK3-203ENST00000415541 NTM-AS1Q6ZSK4 140 aa5.47□□□□□ -1.53
SIK3-203ENST00000415541 K7EQD1 137 aa5.47□□□□□ -1.53
SIK3-203ENST00000415541 Q1T7F1 81 aa5.47□□□□□ -1.53
SIK3-203ENST00000415541 UBE2BP63146 152 aa5.47□□□□□ -1.53
SIK3-203ENST00000415541 C16orf74Q96GX8 76 aa5.46□□□□□ -1.53
SIK3-203ENST00000415541 PRB2P02812 416 aaPredicted RBP5.46□□□□□ -1.54
SIK3-203ENST00000415541 CLPSL2Q6UWE3 100 aa5.46□□□□□ -1.54
SIK3-203ENST00000415541 IGLV1-51P01701 117 aa5.46□□□□□ -1.54
SIK3-203ENST00000415541 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
SIK3-203ENST00000415541 GYPEP15421 78 aa5.45□□□□□ -1.54
SIK3-203ENST00000415541 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
SIK3-203ENST00000415541 TENM4Q6N022 2769 aa5.44□□□□□ -1.54
SIK3-203ENST00000415541 C6orf223Q8N319 242 aa5.44□□□□□ -1.54
SIK3-203ENST00000415541 NDUFS5O43920 106 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 Q6ZTC4 211 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 hDV103S1A0JD37 113 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 PSPHP1O15172 72 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 Q6ZSN1 163 aa5.43□□□□□ -1.54
SIK3-203ENST00000415541 NSD1Q96L73 2696 aaPredicted RBP5.43□□□□□ -1.54
SIK3-203ENST00000415541 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 SCXQ7RTU7 201 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 SPART-AS1P0CW21 52 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 CSMD2Q7Z408 3487 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 LOC100131303A0A0U1RQF7 123 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 UBE2AP49459 152 aa5.42□□□□□ -1.54
SIK3-203ENST00000415541 ANGP03950 147 aaKnown RBP5.41□□□□□ -1.54
SIK3-203ENST00000415541 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
SIK3-203ENST00000415541 LRCOL1A6NCL2 159 aa5.41□□□□□ -1.54
SIK3-203ENST00000415541 Q9UF83 564 aa5.41□□□□□ -1.54
SIK3-203ENST00000415541 C6orf99Q4VX62 202 aa5.4□□□□□ -1.54
SIK3-203ENST00000415541 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
SIK3-203ENST00000415541 IGLV10-54A0A075B6I4 117 aa5.4□□□□□ -1.54
SIK3-203ENST00000415541 HIGD2AQ9BW72 106 aa5.4□□□□□ -1.54
SIK3-203ENST00000415541 MUC7Q8TAX7 377 aa5.4□□□□□ -1.55
SIK3-203ENST00000415541 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
SIK3-203ENST00000415541 IGHV4-30-4P0DP06 118 aa5.39□□□□□ -1.55
SIK3-203ENST00000415541 Q6ZRP5 223 aa5.39□□□□□ -1.55
SIK3-203ENST00000415541 PRO0255Q9UI72 69 aa5.39□□□□□ -1.55
SIK3-203ENST00000415541 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
SIK3-203ENST00000415541 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
SIK3-203ENST00000415541 KRTAP24-1Q3LI83 254 aa5.38□□□□□ -1.55
SIK3-203ENST00000415541 SPATA3Q8NHX4 192 aa5.38□□□□□ -1.55
SIK3-203ENST00000415541 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
SIK3-203ENST00000415541 KRTAP10-3P60369 221 aa5.37□□□□□ -1.55
SIK3-203ENST00000415541 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
SIK3-203ENST00000415541 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
SIK3-203ENST00000415541 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
SIK3-203ENST00000415541 LINC00269Q8N2A0 174 aa5.36□□□□□ -1.55
SIK3-203ENST00000415541 Q6ZQY7 126 aa5.36□□□□□ -1.55
SIK3-203ENST00000415541 TRBV6-8A0A0A6YYG3 113 aa5.35□□□□□ -1.55
SIK3-203ENST00000415541 M0R2N4 97 aa5.35□□□□□ -1.55
SIK3-203ENST00000415541 M0R378 163 aa5.35□□□□□ -1.55
SIK3-203ENST00000415541 NDUFB1O75438 58 aa5.35□□□□□ -1.55
SIK3-203ENST00000415541 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
SIK3-203ENST00000415541 LINC00588Q9Y4M8 146 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms