RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 CNTLNQ9NXG0 1405 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 SLIT1O75093 1534 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 C5P01031 1676 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 MON2Q7Z3U7 1717 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 ANKRD36A6QL64 1941 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 UQCRHLA0A096LP55 91 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 TRBV7-7A0A0K0K1E9 115 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 SPTY2D1-AS1A0A0U1RR47 76 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 FAUP35544 74 aaKnown RBP-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 KRTAP19-7Q3SYF9 63 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 ETDBQ3ZM63 59 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 HEPN1Q6WQI6 88 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 ZNF720Q7Z2F6 126 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 MRPL34Q9BQ48 92 aaKnown RBP-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 DPY30Q9C005 99 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 ALMS1Q8TCU4 4167 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 NRXN1Q9ULB1 1477 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 CUX1P39880 1505 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 KIAA1551Q9HCM1 1747 aa-0.25□□□□□ -2.45
HDAC9-205ENST00000411993 RYR2Q92736 4967 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 COL14A1Q05707 1796 aaKnown RBP-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 TEX14Q8IWB6 1497 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 D6R8Y8 96 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 CCL22O00626 93 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 LEPROTL1O95214 131 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 HMGN3Q15651 99 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 MUSTN1Q8IVN3 82 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 ACBD7Q8N6N7 88 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 PSENENQ9NZ42 101 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 ZFHX3Q15911 3703 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 STAB2Q8WWQ8 2551 aa-0.26□□□□□ -2.45
HDAC9-205ENST00000411993 FAT2Q9NYQ8 4349 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 SAMD9Q5K651 1589 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 PCNX1Q96RV3 2341 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 F8WEM9 126 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 NCMAPQ5T1S8 102 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 ALKAL2Q6UX46 152 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 C9orf62Q8N4C0 152 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 RNF213Q63HN8 5207 aa-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 CLTCQ00610 1675 aaKnown RBP-0.27□□□□□ -2.45
HDAC9-205ENST00000411993 CLIP1P30622 1438 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 RYR1P21817 5038 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 KIF20BQ96Q89 1820 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 M0R143 59 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 IGLC2P0DOY2 106 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 IGLC3P0DOY3 106 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 DEFB112Q30KQ8 113 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 CDKN2A-AS1Q9UH64 79 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 HECTD4Q9Y4D8 3996 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 PDZD2O15018 2839 aa-0.28□□□□□ -2.45
HDAC9-205ENST00000411993 BSNQ9UPA5 3926 aa-0.29□□□□□ -2.46
HDAC9-205ENST00000411993 HIGD1BQ9P298 99 aa-0.29□□□□□ -2.46
HDAC9-205ENST00000411993 SETD2Q9BYW2 2564 aaPredicted RBP-0.29□□□□□ -2.46
HDAC9-205ENST00000411993 CRYBG1Q9Y4K1 1723 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 SPRR2AP35326 72 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 LELP1Q5T871 98 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 WFDC13Q8IUB5 93 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 BCORQ6W2J9 1755 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 PKD1L3Q7Z443 1732 aa-0.3□□□□□ -2.46
HDAC9-205ENST00000411993 EPRSP07814 1512 aaKnown RBP-0.31□□□□□ -2.46
HDAC9-205ENST00000411993 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
HDAC9-205ENST00000411993 UBE2D4Q9Y2X8 147 aa-0.31□□□□□ -2.46
HDAC9-205ENST00000411993 FANCAO15360 1455 aa-0.31□□□□□ -2.46
HDAC9-205ENST00000411993 MYH4Q9Y623 1939 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 UBR3Q6ZT12 1888 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 ATP10BO94823 1461 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 ABCC10Q5T3U5 1492 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 MAGI2Q86UL8 1455 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 H0YGG7 62 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 COX7BP24311 80 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 SMIM11AP58511 58 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 PEA15Q15121 130 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 NMSQ5H8A3 153 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 RGPD2P0DJD1 1756 aa-0.32□□□□□ -2.46
HDAC9-205ENST00000411993 QSER1Q2KHR3 1735 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 ANKRD26Q9UPS8 1709 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 A0A1B0GUT8 65 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 GYPAP02724 150 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 S100A8P05109 93 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 HMGN2P05204 90 aaKnown RBP-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 PKIAP61925 76 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 RPL38P63173 70 aaKnown RBP-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 PLGLAQ15195 96 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 SNHG12Q9BXW3 62 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 VPS8Q8N3P4 1428 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 LRP1BQ9NZR2 4599 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 LRRC7Q96NW7 1537 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 KNL1Q8NG31 2342 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 PREX1Q8TCU6 1659 aa-0.33□□□□□ -2.46
HDAC9-205ENST00000411993 CREBBPQ92793 2442 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 ALKQ9UM73 1620 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 AKAP12Q02952 1782 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 HERC2O95714 4834 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 IQCF6A8MYZ5 107 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms