RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Dkk2Q9QYZ8 259 aa7.68□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv1-22A0A075B5U7 117 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Foxc1Q61572 553 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ociad2Q9D8W7 154 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav14d-3-dv8A0A075B619 120 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv5-16A0A0B4J1P4 117 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm14548E9Q1Z6 680 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr317Q5NCD6 327 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm6525A0A0A6YW33 106 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ube2e2Q91W82 201 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 P2ry6Q9ERK9 328 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Nup210Q9QY81 1886 aaKnown RBP7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cd69P37217 199 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Spred3Q6P6N5 408 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv4-69A0A0B4J1I6 116 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 P01724 129 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 P01727 129 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Wnt2P21552 360 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tpsab1Q02844 273 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Pate4Q09098 99 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tmprss12Q3V0Q7 336 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav2Q5R1I9 109 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 2810408A11RikQ6NSU2 435 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Zmat4Q8BZ94 229 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Q8VC23 124 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 D1Ertd622eQ8VEB3 207 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Scrt1Q99M85 348 aa7.67□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr918E9PVZ7 325 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Sap30O88574 220 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 MycbQ6P8Z1 170 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tmprss5Q9ER04 455 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm21870J3QPN2 123 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Rbm3O89086 153 aaKnown RBP7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cdkn1bP46414 197 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Shisal1Q0VBP7 198 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Vmn1r70Q8R254 298 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Leprotl1Q9CQ74 131 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Phf7Q9DAG9 307 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Lamtor2Q9JHS3 125 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm19410A0A140LJC7 2098 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav21-dv12A0A075B6C4 109 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 LtbP41155 306 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Mapk1ip1lQ8BH93 242 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 H2afb1Q9CQ70 111 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 PifoQ9D9W1 207 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 4930546C10RikE9Q4Y3 121 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm27021M0QWE2 156 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 UngP97931 306 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tmem126aQ9D8Y1 196 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Efemp2Q9WVJ9 443 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Jsrp1Q3MI48 332 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 H1fxQ80ZM5 188 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Med12lQ8BQM9 2157 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 1700031F05RikB1AX30 191 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Atp5g2P56383 146 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ccl21aP84444 133 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ccl21bP86792 133 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ccl21cP86793 133 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Tmem256Q5F285 113 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 C730034F03RikQ8BGL5 111 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Srsf7Q8BL97 267 aaKnown RBP7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cbln3Q9JHG0 197 aa7.66□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Cacna1hO88427 2365 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Igkv14-126A0A075B5K0 117 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm17732E9Q5I2 61 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Lamtor3O88653 124 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 PpyP10601 100 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ndufs5Q99LY9 106 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 2200002J24RikQ9D807 110 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Crim1Q9JLL0 1037 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv1-49A0A0A6YWX2 117 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 A0A1Y7VLU2 103 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Trav12d-1A0N8R0 115 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Hbb-b2P02089 147 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Qrich2A0A140LIY9 2337 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Ighv7-2A0A0A6YX91 119 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Siglec15A7E1W8 342 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Smim19Q80ZU4 107 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Olfr1258Q8VGN6 311 aa7.65□□□□□ -1.18
Scn8a-213ENSMUST00000201549 Gm13030A2APQ6 143 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 9830107B12RikD3Z5D6 160 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 P04212 136 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Olfr1380Q7TQT5 311 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Pf4Q9Z126 105 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Cfap46E9Q2C0 2641 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 P18526 117 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Cr2P19070 1025 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Ripply2Q2WG76 128 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Olfr491Q8VG06 310 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Polr3kQ9CQZ7 108 aa7.65□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Igkv4-79A0A075B5L8 119 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Trbv1A0A0B4J1G7 116 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Zfp27P10077 819 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Ccl6P27784 116 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Trav7d-3Q5R1I1 112 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Olfr484Q8VFD3 321 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Gnb1lQ9EQ15 326 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Zcchc24B2RVL6 241 aaKnown RBP7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 Gm21900J3QP38 180 aa7.64□□□□□ -1.19
Scn8a-213ENSMUST00000201549 KncnQ307W7 124 aa7.64□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms