RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Sbf1Q6ZPE2 1867 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Trdv5A0A075B661 115 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Igkv14-111A0A140T8P9 117 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Defa-rs10Q64263 91 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Mgst3Q9CPU4 153 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Zfp648D3Z0W3 525 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Tmem256Q5F285 113 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Tcf15Q60756 195 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Cd300eQ8K249 196 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Timm10bQ9WV96 100 aa12.71□□□□□ -0.37
Pcdha9-201ENSMUST00000115659 Heatr1G3X9B1 2143 aaKnown RBP12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Smad7O35253 426 aa12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 4930596D02RikQ3V0H9 216 aa12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Q4KKZ1 196 aa12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Dmrt3Q80WT2 476 aa12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Higd1aQ9JLR9 95 aa12.71□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ca5aP23589 299 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Olfr1402Q8VET1 320 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Olfr477Q8VGI6 310 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ros1Q78DX7 2340 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Sptbn2Q68FG2 2388 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Tmem238A9JSM3 176 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Usmg5Q78IK2 58 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 AY761184Q9D848 116 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Phpt1Q9DAK9 124 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Crim1Q9JLL0 1037 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Thap8E9Q695 213 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ovol1Q9WTJ2 267 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Trbv3A0A0A6YYE2 117 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 GgctQ9D7X8 188 aa12.7□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Nr2c2apQ3TV70 140 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Olfr1373Q7TQT6 311 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 OtofQ9ESF1 1997 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm94Q3V2D2 93 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Znf664Q4VA44 261 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 A730015C16RikQ8C992 119 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Eid2bE9Q2Y0 151 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 SlpiP97430 131 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Znf787Q8BIF9 381 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 PigyP0C1P0 71 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Pde6hP61249 83 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Defa23Q5G866 93 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Isg15Q64339 161 aaKnown RBP12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Hapln4Q80WM4 400 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ttc9cQ810A3 171 aa12.69□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm904Q3V2L5 102 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 CklfQ9DAS1 152 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm11444F6QMA6 170 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm27027S4R1M6 97 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Bcl6bO88282 474 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 P01725 110 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Defa1P11477 93 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Svs5P30933 122 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Rpp25lQ99JH1 163 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Plxna3P70208 1872 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Rp1P56716 2095 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ighv1-81A0A075B5Y4 117 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Wnt2P21552 360 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Trav3-1Q5R1I8 114 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Pygo1Q9D0P5 417 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Obox1Q9D350 204 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Klk4Q9Z0M1 255 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm26938S4R185 226 aa12.68□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 P01680 129 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Lmo1Q924W9 156 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Cdk2ap2Q9CPY4 127 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Lypd8Q9D7S0 255 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Igkv4-80A0A075B5L7 116 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Igkv4-63A0A0G2JFU6 117 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 AdipoqQ60994 247 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ighv1-26A0A075B5V0 117 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Trbv13-3A0A0B4J1H2 113 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 MycbQ6P8Z1 170 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Immp1lQ9CQU8 166 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ube2v1Q9CZY3 147 aa12.67□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 SeboxP70368 190 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Psg25Q497W1 475 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Fbxl7Q5BJ29 491 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 9430097D07RikQ8BS47 195 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Mcm3apQ9WUU9 1971 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Lrcol1Q3URS3 161 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Olfr211Q8VGH2 309 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Trav14n-3A0A075B645 120 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ighv8-2A0A0A6YW58 119 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Tmem141A2AJB2 108 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 1700084M14RikB1AT01 78 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm10020E9QAZ2 204 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Ccl17F6R5P4 103 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 P01736 120 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 P18528 98 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Uqcrfs1Q9CR68 274 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Rpl15Q9CZM2 204 aaKnown RBP12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 ThadaA8C756 1938 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Hbb-bsA8DUK4 147 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Gm6871L7N248 545 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 F11rO88792 300 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Hbb-b1P02088 147 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Id3P41133 119 aa12.66□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 PdpnQ62011 172 aa12.65□□□□□ -0.38
Pcdha9-201ENSMUST00000115659 Mapk1ip1Q9D7G9 263 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms