RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Gm4894Q8CA09 118 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Parm1Q923D3 296 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Derl1Q99J56 251 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Gm26727M0QWT1 121 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Zfp36P22893 319 aaKnown RBP13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 G6pc2Q9Z186 355 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 2210407C18RikQ6YI28 220 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Iba57Q8CAK1 358 aaKnown RBP13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Pax9P47242 342 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 NrtnP97463 195 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Atp6v0e1Q9CQD8 81 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Hils1Q9QYL0 170 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ighv1-18A0A0A6YXN4 117 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 H2al2bA9Z055 111 aa13.68□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ighv14-1A0A075B5R4 117 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Saa3P04918 122 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Zfp648D3Z0W3 525 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Erdr1J3QMM0 206 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Sbf2E9PXF8 1872 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Pnrc2Q9CR73 140 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 6430628N08RikA0A0U1RQ45 177 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 TtrP07309 147 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Gata4Q08369 441 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Tanc1Q0VGY8 1856 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 5730522E02RikQ5SP45 163 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Nrn1Q8CFV4 142 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 9330161L09RikQ9D253 136 aa13.67□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Csrp3P50462 194 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Srsf7Q8BL97 267 aaKnown RBP13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Trav16d-dv11A0A075B617 117 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ttc6G3UYY4 1857 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Prp2P05143 317 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Msrb3Q8BU85 253 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 CrebbpP45481 2441 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Znf431E9QAG8 526 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Pex7P97865 318 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Atp6v0bQ91V37 205 aa13.66□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ear14F6YUX7 155 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 SeboxP70368 190 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Cmc4Q61908 68 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Znf146Q8BQN6 292 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 P01655 112 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 P01788 123 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ssbp2Q9CYZ8 361 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Igkv20-101-2A0A0G2JDU3 113 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Tmem241Q3UME2 297 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Hspe1Q64433 102 aaKnown RBP13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Dock10Q8BZN6 2150 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ighv1-58A0A075B5W9 117 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Gm9747Q810H1 104 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Lgals4Q8K419 326 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Gnb1lQ9EQ15 326 aa13.65□□□□□ -0.22
Shroom3-201ENSMUST00000113051 Ckap5A2AGT5 2032 aaKnown RBP13.65□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trav6d-5A0A075B6B9 112 aa13.65□□□□□ -0.23
Shroom3-201ENSMUST00000113051 P01736 120 aa13.65□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Znf329Q6GQR8 522 aa13.65□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ighv1-80A0A075B5Y3 117 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm5089A1L3C8 106 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Rpl36aP83882 106 aaKnown RBP13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ang2Q64438 145 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm933J3QPC1 141 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Mrps21P58059 87 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trav7n-4A0A075B620 113 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 H2al1oL7MU04 110 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 PpyP10601 100 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm15091B1AZM2 449 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ttc9cQ810A3 171 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Prr14lE9Q7C4 1971 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ighv5-12-4A0A0A6YWG4 117 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ighv1-62-3P01754 117 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Smim6Q3U0I6 56 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm20854Q62461 227 aa13.64□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ighv8-6A0A0A6YXA3 118 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Igkv14-126A0A075B5K0 117 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ovol1Q9WTJ2 267 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 LfngO09010 378 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Zfp236S4R299 1847 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Higd1aQ9JLR9 95 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trav6d-3A0A075B6B3 112 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trav6-3Q5R1E6 112 aa13.63□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm19410A0A140LJC7 2098 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 E130218I03RikA0A0U1RNU5 63 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 P01811 117 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 GrnP28798 589 aaKnown RBP13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Znf787Q8BIF9 381 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Anapc13Q8R034 74 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trdv2-1A0A0G2JGB9 116 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm12169F2Z474 250 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Tcl1b4P56844 120 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Trbv1A0A0B4J1G7 116 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Tmem86bQ497J1 226 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Chac1Q8R3J5 223 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Plxnd1Q3UH93 1925 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Ighv1-69A0A0G2JFS5 117 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 P04946 108 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Fhl4Q8CDC8 279 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Atp23Q9CWQ3 201 aa13.62□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Gm7102J3QQ10 178 aa13.61□□□□□ -0.23
Shroom3-201ENSMUST00000113051 Olfr745Q7TRL9 328 aa13.61□□□□□ -0.23
Shroom3-201ENSMUST00000113051 P01787 123 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms