RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Plekhb2Q9QZC7 221 aa15.43■□□□□ 0.06
Trim71-201ENSMUST00000111816 Tcf20Q9EPQ8 1987 aa15.43■□□□□ 0.06
Trim71-201ENSMUST00000111816 Igkv4-57-1A0A075B5M4 119 aa15.43■□□□□ 0.06
Trim71-201ENSMUST00000111816 4930426L09RikE9Q0N7 123 aa15.43■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gm16686Q3UMN9 131 aa15.43■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01644 108 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01645 108 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01646 108 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01647 108 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 PolP10400 120 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Sfxn3Q91V61 321 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 KncnQ307W7 124 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Trav2Q5R1I9 109 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 DynapQ9D7M5 161 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Ighv8-9A0A0G2JET1 119 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Amn1B8JKV0 258 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Fgf11P70378 225 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Rspo3Q2TJ95 277 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Lims1Q99JW4 325 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Plpp2Q9DAX2 276 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Ighv9-3A0A0B4J1J5 117 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Crim1Q9JLL0 1037 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Il19Q8CJ70 176 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Tmem167aQ9CR64 72 aa15.42■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gm12355A2A4X6 163 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Srsf3P84104 164 aaKnown RBP15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Igkv6-14A0A140T8P1 115 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Igkv4-80A0A075B5L7 116 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Ccl2P10148 148 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Pappa2E9PZ87 1789 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Il12rb1Q60837 738 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Mtatp8P03930 67 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Plscr4P58196 326 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 ElaneQ3UP87 265 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gm20403G3UYB0 123 aa15.41■□□□□ 0.06
Trim71-201ENSMUST00000111816 Tmem240B2RWJ3 173 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gm2174F6ZVF2 133 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Igkv4-58A0A0G2JGI6 119 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01661 131 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01662 111 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 P01663 111 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Mpv17l2Q8VIK2 200 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Rp1l1Q8CGM2 1859 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gng5Q80SZ7 68 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Negr1Q80Z24 348 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Prss41Q920S2 322 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Lypd2Q9DD23 127 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 A6H6Q4 206 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Gm7489Q3UT34 171 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Tmem219Q9D123 240 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Ca1P13634 261 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Slc25a16Q8C0K5 332 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Rpp25Q91WE3 199 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Prss30Q9QYZ9 310 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Igkv1-99F6XWB2 120 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Clpsl2Q3UW21 102 aa15.4■□□□□ 0.06
Trim71-201ENSMUST00000111816 Trav13n-4A0A0G2JG01 110 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 LeprotO89013 131 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Crlf1Q9JM58 425 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm11020F6ZGD5 61 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Thy1P01831 162 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Polr3kQ9CQZ7 108 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Tmem52Q9D702 196 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 P01664 111 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm9920D3YVZ2 140 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ly86O88188 162 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Pax1P09084 446 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Lhfpl6Q8BM86 200 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Zc3h3Q8CHP0 950 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 MplkipQ9D011 178 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 PtprfA2A8L5 1898 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Trav14d-1A0A075B6B1 121 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Tm4sf19E9Q9H8 206 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 BC048502Q80Y74 154 aa15.39■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ighv1-49A0A0A6YWX2 117 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 P01680 129 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Prss28Q924N9 274 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Psmb11Q8BG41 302 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Mrpl14Q9D1I6 145 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm13199Q8C8E0 125 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Olfr491Q8VG06 310 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ndufb8Q9D6J5 186 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm29666A0A087WQ99 126 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Igkv4-72A0A0B4J1I4 117 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 OdamA1E960 273 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Vdac2Q60930 295 aaKnown RBP15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ifi27l2aQ8R412 90 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Lime1Q9EQR5 269 aa15.38■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm14548E9Q1Z6 680 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Pla2g3Q8BZT7 504 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Gm20481G3UXK4 153 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Ccl11P48298 97 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Tal2Q62282 108 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Fbxl7Q5BJ29 491 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 Znrf1Q91V17 227 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 ClpsQ9CQC2 113 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 DnlzQ9D113 177 aa15.37■□□□□ 0.05
Trim71-201ENSMUST00000111816 PpyP10601 100 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Igkv8-24A0A140T8P5 121 aa15.36■□□□□ 0.05
Trim71-201ENSMUST00000111816 Slc25a35Q5SWT3 300 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms